Skip to main content
. 2016 Mar 1;11(3):e0149359. doi: 10.1371/journal.pone.0149359

Table 4. Comparison of virtual and in vitro results for the peptide analogs.

Analogs Total binding energy In vitro binding Agonistic response Antagonistic response
hSCT -11.53 Present Present Absent
Analog 1 +7465.64 Unstable Absent Absent
Analog 2 > +1387.81 Unstable Absent Absent
Analog 3 > +1387.81 Unstable Absent Absent
Analog 4 > +12.18 Unstable Absent Absent
Analog 5 - Unstable Absent Absent
Analog 6 +12.30 Unstable Absent Absent
Analog 7 - Unstable Absent Absent
Analog 8 +4.69 Unstable Absent Absent
Analog 9 - Unstable Absent Absent
Analog 10 - Unstable Absent Absent
Analog 11 >1387.81 Unstable Absent Absent
Analog 12 - Unstable Absent Absent
Analog 13 +1010.29 Unstable Absent Absent
Analog 14 >+10.24 Unstable Absent Absent
Analog 15 -10.21 Present Present Absent
Analog 16 -1.38 Absent Absent Absent
Analog 17 +14.45 Absent Absent Absent
Analog 18 +4.23 Absent Absent Absent
Analog 19 >+77.89 Unstable Absent Absent
Analog 20 >+3541.03 Unstable Absent Absent
Analog 21 Unstable Absent Absent

The analogs containing Nt and Ct modifications were screened for virtual interactions and exhibit affinity for the active receptor model, whereas in the in vitro assay with the receptor in the resting state, the analogs fail to bind or activate the receptor. Model of analog 5, 7, 9, 10 and 12 were not modeled due to unavailability of a template with non-standard amino acids.