Table 1.
IS_113-VS-IS_114 |
Stage 1: WT_115-VS-MT_118 |
Stage 2: WT_116-VS-MT_119 |
Stage 3: WT_117-VS-MT_121 |
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Cut-off at | Number | Total | Coverage (%) | Cut-off at | Number | Total | Coverage (%) | Cut-off at | Number | Total | Coverage (%) | Cut-off at | Number | Total | Coverage (%) |
0.10 | 1126 | 2906 | 38.75 | 0.10 | 839 | 3109 | 26.99 | 0.10 | 982 | 2975 | 33.01 | 0.10 | 810 | 2702 | 29.98 |
0.20 | 2038 | 2906 | 70.13 | 0.20 | 1754 | 3109 | 56.42 | 0.20 | 1938 | 2975 | 65.14 | 0.20 | 1728 | 2702 | 63.95 |
0.30 | 2540 | 2906 | 87.41 | 0.30 | 2407 | 3109 | 77.42 | 0.30 | 2471 | 2975 | 83.06 | 0.30 | 2298 | 2702 | 85.05 |
0.40 | 2752 | 2906 | 94.70 | 0.40 | 2749 | 3109 | 88.42 | 0.40 | 2668 | 2975 | 89.68 | 0.40 | 2514 | 2702 | 93.04 |
0.50 | 2851 | 2906 | 98.11 | 0.50 | 2852 | 3109 | 91.73 | 0.50 | 2760 | 2975 | 92.77 | 0.50 | 2595 | 2702 | 96.04 |
0.60 | 2890 | 2906 | 99.45 | 0.60 | 2883 | 3109 | 92.73 | 0.60 | 2811 | 2975 | 94.49 | 0.60 | 2620 | 2702 | 96.97 |
0.70 | 2903 | 2906 | 99.90 | 0.70 | 2914 | 3109 | 93.73 | 0.70 | 2834 | 2975 | 95.26 | 0.70 | 2633 | 2702 | 97.45 |
0.80 | 2905 | 2906 | 99.97 | 0.80 | 2974 | 3109 | 95.66 | 0.80 | 2864 | 2975 | 96.27 | 0.80 | 2639 | 2702 | 97.67 |
0.90 | 2906 | 2906 | 100.00 | 0.90 | 2995 | 3109 | 96.33 | 0.90 | 2870 | 2975 | 96.47 | 0.90 | 2656 | 2702 | 98.30 |
>1.0 | 2906 | 2906 | 100.00 | >1.0 | 3109 | 3109 | 100.00 | >1.0 | 2975 | 2975 | 100.00 | >1.0 | 2702 | 2702 | 100.00 |
CV (average)=0.17 | CV (average)=0.24 | CV (average)=0.21 | CV (average)=0.19 |
The table lists the cut-off points (variation), and the corresponding coverage (%) of quantified proteins.
a. “Cut off at” means the variation between the fold change and 1, and the fold change is calculated between two samples in the three experements.
b. “Number” means the number of proteins meet the cut off value.
c. “Total” means the total number of proteins quantified in at least two exprements.
d. “Coverage (%)” is calculated as the “Number” divided by the “Total”,and the higer coverage at a smaller cut off value means the better repeatability.