Table 5.
Nucleotide content and gene count levels of the genome
| Attribute | Genome (total) |
|
|---|---|---|
| Value | % of totala | |
| Size (bp) | 4 569 428 | 100 |
| G+C content (bp) | 2 056 242 | 45.7 |
| Coding region (bp) | 3 977 838 | 87.05 |
| Total genes | 4427 | 100 |
| RNA genes | 75 | 1.69 |
| Protein-coding genes | 4352 | 98.30 |
| Genes with function prediction | 3176 | 71.74 |
| Genes assigned to COGs | 2820 | 63.70 |
| Genes with peptide signals | 223 | 5.03 |
| Genes with transmembrane helices | 745 | 16.82 |
| ORFan genes | 128 | 2.89 |
COGs, Clusters of Orthologous Groups database.
a
Total is based on either size of genome (bp) or total number of protein-coding genes in annotated genome.