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. 2016 Feb 16;7(2):9. doi: 10.3390/genes7020009

Table 1.

Studies included in meta-analysis.

SN Author Reference Country Ethnicity Cancer Type Case/Control pHWE MAF Genotyping Method
DCC rs714 (A > G)
1 Toma et al., 2009 [34] Romania Caucasian CRC 120/60 0.603 0.28 PCR-RFLP
2 Rai et al., 2013 [10] India Asian GBC 406/260 0.062 0.38 PCR-RFLP
3 Malik et al., 2013 [12] India Asian EC 135/195 0.187 0.36 PCR-RFLP
4 Malik et al., 2013 [12] India Asian GC 108/195 0.187 0.36 PCR-RFLP
5 Djansugurova et al., 2015 [13] Kazakhstan Mixed CRC 249/242 0.187 0.36 PCR-RFLP
PSCA rs2294008 (C > T)
1 Wu et al., 2009 [36] China Asian GC 1736/1020 0.587 0.28 PCR-RFLP
2 Matsuo et al., 2009 [27] Japan Asian GC 708/708 0.638 0.38 Taqman
3 Wang et al., 2010 [28] China Asian BC 581/580 0.508 0.27 PCR-RFLP
4 Lu et al., 2010 [37] China Asian GC 1053/1100 0.166 0.25 PCR-RFLP
5 Ou et al., 2010 [38] China Asian GC 196/246 0.924 0.27 PCR-LDR
6 Zeng et al., 2011 [39] China Asian GC 460/549 0.493 0.27 PCR-RFLP
7 Song et al., 2011 [40] Korea Asian GC 3245/1700 0.131 0.48 PCR-RFLP
8 Joung et al., 2011 [41] Korea Asian PC 194/169 0.963 0.47 MASS ARRAY
9 Lochhead et al., 2011 [42] USA Caucasian EC 159/211 0.405 0.5 Taqman
10 Lochhead et al., 2011 [42] USA Caucasian GC 309/211 0.405 0.5 Taqman
11 Sala et al., 2012 [43] Europe Caucasian GC 411/1530 0.088 0.44 SNP ARRAY
12 Kim et al., 2012 [44] Korea Asian BrC 456/461 0.324 0.49 MALDI-TOF MS
13 Smith et al., 2012 [45] Scotland Caucasian CRC 77/804 0.981 0.4 Taqman
14 Li et al., 2012 [46] China Asian GC 300/300 0.65 0.26 MASS-ARRAY IPLEX
15 Ono et al., 2013 [47] Japan Asian GBC 44/173 0.242 0.39 Taqman
16 Ma et al., 2013 [48] China Asian BC 184/962 0.562 0.25 MASS-ARRAY IPLEX
17 Zhao et al., 2013 [35] China Asian GC 717/951 0.913 0.3 PCR-DHPLC
18 Rai et al., 2013 [24] India Asian GBC 405/247 0.492 0.43 Taqman
19 Dai et al., 2014 [49] China Asian EC 2083/2220 0.944 0.27 Taqman
20 Sun et al., 2014 [50] Texas Caucasian GC 132/125 0.926 0.49 Taqman
21 Wang et al., 2014 [51] China Asian BC 1210/1008 0.739 0.25 Taqman
22 Lee et al., 2014 [52] Korea Asian BC 411/1700 0.13 0.48 HRM
23 Kupcinskas et al., 2014 [53] Lithuania Caucasian GC 252/246 0.834 0.48 Taqman
24 Sun et al., 2015 [54] China Asian GC 692/774 0.105 0.28 Taqman
25 MA et al., 2015 [55] Spain Caucasian GC 603/675 0.349 0.45 Taqman
26 Ichikawa et al., 2015 [56] Japan Asian GC 193/266 0.185 0.42 PCR-RFLP
27 Zhang et al., 2015 [57] China Asian GC 476/481 0.617 0.27 MASS ARRAY
28 Kupcinskas et al., 2015 [58] Latvia Caucasian CRC 192/382 0.943 0.48 Taqman
PSCA rs2976392 (G > A)
1 Wu et al., 2009 [36] China Asian GC 1724/1002 0.35 0.29 PCR-RFLP
2 Matsuo et al., 2009 [27] Japan Asian GC 707/707 0.635 0.37 Taqman
3 Lu et al., 2010 [37] China Asian GC 1043/1082 0.336 0.26 PCR-RFLP
4 Ou et al., 2010 [38] China Asian GC 196/246 0.298 0.26 PCR-LDR
5 Joung et al., 2011 [41] Korea Asian PC 194/168 0.848 0.47 MASS ARRAY
6 Kim et al., 2012 [44] Korea Asian BrC 453/460 0.397 0.49 MALDI-TOF MS
7 Ono et al., 2013 [47] Japan Asian GBC 44/173 0.328 0.61 Taqman
8 Kupcinskas et al., 2014 [53] Lithuania Caucasian GC 249/232 0.986 0.48 Taqman
9 Sun et al., 2015 [54] China Asian GC 692/774 0.13 0.29 Taqman
10 Zhang et al., 2015 [57] China Asian GC 476/481 0.939 0.28 MASS ARRAY
11 Kupcinskas et al., 2015 [58] Latvia Caucasian CRC 192/382 0.856 0.48 Taqman

GC—Gastric cancer, BC—Bladder cancer, GBC—Gallbladder cancer, EC—Esophageal cancer, BrC—Breast Cancer, CRC—Colorectal cancer, PC—Prostate Cancer, HWE Hardy—Weinberg equilibrium, MAF—Minor allelic frequency, PCR—Polymerase chain reaction, RFLP—Restriction fragment length polymorphism, LDR—Ligation detection reaction, DHPLC—Denaturing high performance liquid chromatography, HRM—High-resolution melting, SNP—Single nucleotide polymorphism, MALDI-TOF-MS—Matrix Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry.