Table 3.

The sixty pathways most represented in the transcriptome of H. indica IJs

Pathway ID	Pathway term	No of proteins
3010	Ribosome	117
3040	Spliceosome	95
4141	Protein processing in endoplasmic reticulum	88
3013	RNA transport	87
5200	Pathways in cancer	86
5016	Huntington's disease	85
190	Oxidative phosphorylation	74
5010	Alzheimer's disease	73
230	Purine metabolism	70
4144	Endocytosis	70
5012	Parkinson's disease	68
5169	Epstein-Barr virus infection	68
5166	HTLV-I infection	67
1200	Carbon metabolism	63
4932	Non-alcoholic fatty liver disease, NAFLD	63
4120	Ubiquitin mediated proteolysis	62
5203	Viral carcinogenesis	61
4110	Cell cycle	59
240	Pyrimidine metabolism	58
5205	Proteoglycans in cancer	55
3008	Ribosome biogenesis in eukaryotes	53
4151	PI3K-Akt signaling pathway	53
3015	mRNA surveillance pathway	52
4010	MAPK signaling pathway	52
4111	Cell cycle-yeast	48
4015	Rap1, signaling pathway	47
4510	Focal adhesion	47
4014	Ras signaling pathway	46
4810	Regulation of actin cytoskeleton	46
4910 (ko04910)	Insulin signaling pathway	46
4142	Lysosome	45
4068	FoxO signaling pathway	42
4152	AMPK signaling pathway	42
4114	Oocyte meiosis	42
3018	RNA degradation	41
4024	cAMP signaling pathway	41
4310	Wnt signaling pathway	39
4390	Hippo signaling pathway	39
5206	MicroRNAs in cancer	38
1230	Biosynthesis of amino acids	37
4530	Tight junction	37
4062	Chemokine signaling pathway	37
4722	Neurotrophin signaling pathway	37
4146	Peroxisome	36
4113	Meiosis-yeast	36
5168	Herpes simplex infection	36
564	Glycerophospholipid metabolism	35
4071	Sphingolipid signaling pathway	35
4145	Phagosome	35
4914	Progesterone-mediated oocyte maturation	35
4921	Oxytocin signaling pathway	35
4919	Thyroid hormone signaling pathway	35
3420	Nucleotide excision repair	32
4022 (ko04022)	cGMP-PKG signaling pathway	32
4550	Signaling pathways regulating pluripotency of stem cells	32
3050	Proteasome	31
4721	Synaptic vesicle cycle	30
510	N-Glycan biosynthesis	29
3022	Basal transcription factors	29
5100	Bacterial invasion of epithelial cells	29