Table 4.

KOG analysis of genes with FPKM Values ≥ 1000 and ≥100

KOG function	Function ID	Gene count
FPKM >1000
Translation, ribosomal structure and biogenesis	J	27
Posttranslational modification, protein turnover, chaperones	O	10
Multiple classes		9
Intracellular trafficking, secretion, and vesicular transport	U	7
Lipid transport and metabolism	I	7
Cytoskeleton	Z	4
Defense mechanisms	V	2
Energy production and conversion	C	2
General function prediction only	R	2
Transcription	K	2
Carbohydrate transport and metabolism	G	1
Chromatin structure and dynamics	B	1
Extracellular structures	W	1
Inorganic ion transport and metabolism	P	1
Grand total		76
FPKM >100
Posttranslational modification, protein turnover, chaperones	O	279
Multiple classes		264
General function prediction only	R	235
Translation, ribosomal structure and biogenesis	J	189
Function unknown	S	160
Intracellular trafficking, secretion, and vesicular transport	U	155
Signal transduction mechanisms	T	131
Energy production and conversion	C	124
RNA processing and modification	A	119
Transcription	K	108
Cytoskeleton	Z	90
Lipid transport and metabolism	I	84
Carbohydrate transport and metabolism	G	77
Amino acid transport and metabolism	E	66
Inorganic ion transport and metabolism	P	53
Cell cycle control, cell division, chromosome partitioning	D	39
Replication, recombination and repair	L	36
Nucleotide transport and metabolism	F	25
Chromatin structure and dynamics	B	24
Secondary metabolites biosynthesis, transport and catabolism	Q	21
Extracellular structures	W	18
Coenzyme transport and metabolism	H	18
Cell wall/membrane/envelope biogenesis	M	15
Defense mechanisms	V	13
Nuclear structure	Y	1
Cell motility	N	1
Grand total		2345