Table 6.
RNAi effector genes discovered in the IJ stage of the H. indica
S. No. | C. elegans ortholog | H. indica IJ | H. bacteriophora |
---|---|---|---|
Small RNA biosynthetic proteins | |||
Total | 10 | 6 | 2 |
1 | drh-3 | + | - |
2 | drsh-1 | + | + |
3 | xpo-1 | + | - |
4 | xpo-2 | + | - |
5 | dcr-1 | + | + |
6 | drh-1 | + | - |
dsRNA uptake and spreading and siRNA amplification effectors | |||
Total | 12 | 4 | 5 |
7 | smg-2 | + | + |
8 | smg-6 | + | - |
9 | ego-1 | + | + |
10 | smg-5 | - | + |
11 | rsd-3 | + | + |
12 | sid-1 | - | + |
Argonautes (AGOs) | |||
Total | 28 | 3 | 1 |
13 | alg-1 | + | - |
14 | rde-1 | - | + |
15 | ppw-2 | + | - |
16 | nrde-3 | + | - |
RNA-induced Silencing Complex (RISC) components | |||
Total | 4 | 2 | 2 |
17 | tsn-1 | + | + |
18 | ain-1a | + | - |
19 | vig-1 | - | + |
RNAi inhibitors | |||
Total | 9 | 2 | 0 |
20 | eri-1 | + | - |
21 | xrn-2 | + | - |
Nuclear RNAi effectors | |||
Total | 15 | 7 | 2 |
22 | mut-7 | + | - |
23 | cid-1 | + | - |
24 | gfl-1 | + | + |
25 | mes-2 | + | - |
26 | rha-1 | + | - |
27 | zfp-1 | + | + |
28 | mut-2 | + | - |