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. 2016 Mar 1;17:113. doi: 10.1186/s12859-016-0962-4

Table 2.

Results on execution time (sec), the number of enumerated structures by BfsBenNaphEnum and MOLGEN, and the number of chemical compounds exist in PubChem database for several instances

Chemical formula #atoms #all compounds in PubChem #enumerated structures Computational time (sec)
n b C N O H BfsBenNaphEnum MOLGEN
C 7 O 2 H 8 0 1 1 0 2 8 728 19 0.001 0.053
C 8 O 3 H 10 0 1 2 0 3 10 1602 307 0.002 0.124
C 9 O 4 H 10 0 1 3 0 4 10 1469 6406 0.010 1.699
C 10 N 2 O 4 H 10 0 1 4 2 4 10 1592 8,333,991 12.260 957.53
1 0 0 2 4 10 7980 0.031 69.51
C 11 N 2 H 10 0 1 5 2 0 10 790 9012 0.021 630.44
1 0 1 2 0 10 56 0.005 24.061
C 12 N 1 O 1 H 11 0 1 6 1 1 11 1582 80,883 0.155 2,611.57
0 2 0 1 1 11 33 0.001 98.99
1 0 2 1 1 11 888 0.009 560.98
C 13 O 2 H 12 0 1 7 0 2 12 1239 162,122 0.289 6,497.55
0 2 1 0 2 12 190 0.002 2,069.3
1 0 3 0 2 12 2458 0.013 1,731.92
C 14 O 4 H 12 0 1 8 0 4 12 1 397 19,514,480 35.655 197,264.54
0 2 2 0 4 12 15,581 0.021 107,509.42
1 0 4 0 4 12 337,178 1.061 97,326.71