Table 2.
Risk Variant Location |
Odds Ratioa | |
---|---|---|
Chromosome | Nearby Gene | |
All glioma typesb | ||
3 | TERC | 1.2 |
5 | TERT | 1.3 |
7 | EGFR | 1.2 |
8 | CCDC26c | 1.4 |
9 | CDKN2B/ANRIL | 1.3 |
11 | PHLDB1 | 1.2 |
17 | TP53 | 2.4 |
20 | RTEL1 | 1.2 |
Oligodendroglial and IDH-mutated astrocytic tumors | ||
8 | CCDC26d | 6.3 |
aOdds ratios are for number of risk alleles. The source of the odds ratios are the following references: TERC [reference #10]; TERT, EGFR, CCDC26 (for all gliomas), CDKN2B/ANRIL, PHLDB1, RTEL1 [reference #6]; TP53 [reference #3]; CCDC26 for oligodendroglial and IDH-mutated astrocytic tumors [reference #19].
bIncludes WHO grades II-IV astrocytoma, oligodendroglioma, oligoastrocytoma.
cvariant is rs4295627.
dvariant is rs55705857.
Abbreviations: TERC, telomerase RNA component; TERT, telomerase reverse transcriptase; EGFR, epidermal growth factor receptor; CCDC26, coiled-coil domain-containing protein 26; CDKN2B, cyclin-dependent kinase inhibitor 2B/ANRIL, antisense noncoding RNA in the INK4 locus; PHLDB1, pleckstrin homology-like domain, family B, member 1; TP53, tumor protein P53; RTEL1, regulator of telomere elongation helicase 1.