Supplement Table-2.
Locus | Djakoré | Gobra zebu | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N | Na | Rs | HO | HE | FIS | PIC | HS | PHWE | N | Na | Rs | HO | HE | FIS | PIC | HS | PHWE | |
BM1818 | 27 | 10 | 6.756 | 0.926 | 0.854 | −0.086 | 0.818 | 0.853 | NS | 24 | 8 | 6.245 | 0.833 | 0.833 | 0 | 0.792 | 0.833 | NS |
BM2113 | 25 | 8 | 6.165 | 0.760 | 0.815 | 0.068 | 0.772 | 0.816 | NS | 24 | 8 | 6.653 | 0.542 | 0.858 | 0.373 | 0.820 | 0.865 | S** |
ETH10 | 25 | 8 | 6.254 | 0.840 | 0.829 | −0.013 | 0.788 | 0.829 | NS | 22 | 7 | 5.450 | 0.591 | 0.773 | 0.239 | 0.721 | 0.777 | NS |
ETH152 | 26 | 8 | 6.077 | 0.885 | 0.835 | −0.060 | 0.794 | 0.834 | S*** | 26 | 6 | 4.908 | 0.769 | 0.742 | −0.037 | 0.689 | 0.742 | NS |
ETH225 | 28 | 6 | 4.780 | 0.643 | 0.722 | 0.111 | 0.669 | 0.724 | NS | 22 | 6 | 4.611 | 0.682 | 0.708 | 0.038 | 0.652 | 0.709 | NS |
HEL1 | 29 | 7 | 5.871 | 0.897 | 0.831 | −0.080 | 0.791 | 0.829 | NS | 25 | 10 | 7.314 | 0.880 | 0.873 | −0.008 | 0.839 | 0.873 | NS |
HEL9 | 30 | 11 | 7.182 | 0.800 | 0.871 | 0.082 | 0.840 | 0.872 | NS | 25 | 11 | 7.773 | 0.840 | 0.870 | 0.035 | 0.838 | 0.871 | NS |
INRA063 | 28 | 3 | 2.620 | 0.250 | 0.382 | 0.350 | 0.334 | 0.385 | S* | 19 | 5 | 4.330 | 0.474 | 0.700 | 0.329 | 0.634 | 0.706 | NS |
INRA037 | 23 | 6 | 4.237 | 0.783 | 0.694 | −0.131 | 0.623 | 0.692 | NS | 17 | 7 | 5.719 | 0.706 | 0.802 | 0.123 | 0.748 | 0.805 | NS |
MM12 | 28 | 12 | 7.539 | 0.821 | 0.840 | 0.033 | 0.816 | 0.850 | NS | 22 | 10 | 6.781 | 0.773 | 0.796 | 0.029 | 0.754 | 0.797 | NS |
TGLA53 | 21 | 10 | 6.777 | 0.667 | 0.810 | 0.180 | 0.768 | 0.813 | S* | 17 | 10 | 7.396 | 0.824 | 0.836 | 0.015 | 0.792 | 0.836 | NS |
Mean | 26.36 | 8.091 | 5.842 | 0.752 | 0.771 | 0.026 | 0.728 | 0.772 | S** | 22.09 | 8 | 6.107 | 0.719 | 0.799 | 0.102 | 0.752 | 0.801 | S* |
Locus | Maure zebu | N’Dama | ||||||||||||||||
N | Na | Rs | HO | HE | PIC | FIS | HS | PHWE | N | Na | Rs | HO | HE | PIC | FIS | HS | PHWE | |
BM1818 | 22 | 7 | 5.894 | 0.864 | 0.831 | 0.785 | −0.040 | 0.830 | NS | 16 | 8 | 5.968 | 0.875 | 0.821 | 0.765 | −0.068 | 0.819 | NS |
BM2113 | 22 | 9 | 6.410 | 0.727 | 0.818 | 0.775 | 0.113 | 0.820 | NS | 14 | 6 | 5.434 | 0.643 | 0.815 | 0.753 | 0.217 | 0.821 | NS |
ETH10 | 26 | 7 | 5.311 | 0.654 | 0.784 | 0.734 | 0.168 | 0.786 | NS | 21 | 7 | 4.931 | 0.571 | 0.713 | 0.646 | 0.202 | 0.717 | NS |
ETH152 | 24 | 7 | 4.256 | 0.750 | 0.640 | 0.578 | −0.176 | 0.638 | NS | 20 | 4 | 3.546 | 0.350 | 0.517 | 0.466 | 0.328 | 0.521 | S* |
ETH225 | 25 | 5 | 4.203 | 0.560 | 0.665 | 0.607 | 0.161 | 0.668 | NS | 14 | 7 | 5.783 | 0.714 | 0.783 | 0.722 | 0.090 | 0.786 | NS |
HEL1 | 28 | 7 | 6.075 | 0.643 | 0.842 | 0.804 | 0.240 | 0.846 | S* | 20 | 8 | 5.483 | 0.850 | 0.771 | 0.714 | −0.106 | 0.768 | NS |
HEL9 | 26 | 9 | 7.062 | 0.883 | 0.867 | 0.833 | −0.020 | 0.867 | NS | 21 | 8 | 6.422 | 0.667 | 0.867 | 0.765 | 0.177 | 0.811 | NS |
INRA063 | 22 | 4 | 3.682 | 0.591 | 0.580 | 0.523 | −0.018 | 0.580 | NS | 23 | 5 | 3.657 | 0.522 | 0.655 | 0.576 | 0.207 | 0.658 | NS |
INRA037 | 21 | 7 | 5.684 | 0.762 | 0.811 | 0.761 | 0.061 | 0.812 | NS | 13 | 7 | 5.647 | 0.538 | 0.689 | 0.634 | 0.225 | 0.696 | S* |
MM12 | 23 | 10 | 5.960 | 0.870 | 0.744 | 0.694 | −0.173 | 0.741 | NS | 17 | 4 | 3.694 | 0.588 | 0.626 | 0.554 | 0.061 | 0.627 | NS |
TGLA53 | 12 | 9 | 7.688 | 0.667 | 0.877 | 0.821 | 0.247 | 0.886 | NS | 8 | 6 | 6 | 0.750 | 0.833 | 0.748 | 0.106 | 0.839 | NS |
Mean | 22.81 | 7.364 | 5.657 | 0.724 | 0.769 | 0.719 | 0.059 | 0.770 | S* | 17 | 6.364 | 5.142 | 0.642 | 0.735 | 0.667 | 0.123 | 0.733 | S* |
Number of individuals typed per locus (N); observed number of alleles per locus (Na); allelic richness per locus (Rs); observed (HO) and unbiased expected heterozygosity (HE); gene diversity of [20] (HS); amount of inbreeding within populations according to Weir and Cockerham, 1984 (FIS). PIC=Polymorphic information content; p values of test for HWE (PHWE); permutation tests (1000 replicates) of the inbreeding coefficient (FIS): Values in bold correspond to significant tests (percentage of replicates with a value of FIS less than that observed, i.e., >95%); NS: p>0.05=Not significant;
: p<0.05=Significant,
p<0.01=Very significant,
p<0.001=Highly significant