Table 5. Comparison of T3SS gene expression in LB broth with 5% albumin to LB Broth.
Gene | Proteina | LB broth/5% albumin:LB brothb | Average of Burn Pts: Healthy volunteerc |
---|---|---|---|
exoT | ExoT, effector protein | 2 | 5 |
exoY | ExoY, effector protein | 2 | 2 |
exsB | ExsB, T3SS regulation | 2 | 3 |
pcrD | PcrD, translocation apparatus operon | 1 | 4 |
pcrG | PcrG, translocation apparatus operon | 3 | 4 |
pcrH | PcrH, translocation apparatus operon | 2 | 6 |
pcrV | PcrV, translocation apparatus operon | 2 | 6 |
popB | PopB, translocation apparatus operon | 2 | 4 |
popD | PopD, translocation apparatus operon | 2 | 4 |
popN | PopN, translocation apparatus operon | 2 | 3 |
pscB | PscB, needle complex operon | 2 | 15 |
pscC | PscC, needle complex operon | 2 | 17 |
pscD | PscD, needle complex operon | 2 | 10 |
pscE | PscE, needle complex operon | 2 | 5 |
pscF | PscF, needle complex operon | 2 | 5 |
pscG | PscG, needle complex operon | 1 | 6 |
pscH | PscH, needle complex operon | 1 | 14 |
pscJ | PscJ, needle complex operon | 2 | 7 |
pscN | PscN, second needle complex operon | 2 | 3 |
aProduct names for PA14 genes were obtained from the MGH-ParaBioSys:NHLBI Program for Genomic Applications, Massachusetts General Hospital and Harvard Medical School, Boston, MA (http://pga.mgh.harvard.edu; accessed 10Nov2015) [45] made available by the Pseudomonas Genome Database (http://www.pseudomonas.com/; accessed 10Nov2015) [44].
bExpression of genes within PA14 that was grown in in LB broth with 5% albumin was compared with expression when PA14 was grown in LB broth.
cAverage of gene expression within PA14 grown in whole blood from the three severely burned patients was compared with expression when PA14 was grown in whole blood from a healthy volunteer calculated from results used to derive Fig 4.