Table I. Summary of RNA sequencing metrics used to produce the transcriptome profiles for GCs and M cells from G. gynandra and T. hassleriana.
For details of the pipeline used, see “Materials and Methods.”
| Sequence Metric | Value | |||
|---|---|---|---|---|
| Read length | 100 bp | |||
| Read type | Single | |||
| Replicates | 3 | |||
| G. gynandra GC | G. gynandra M | T. hassleriana GC | T. hassleriana M | |
| No. of reads | 101,767,206 | 72,294,753 | 134,681,715 | 121,609,573 |
| Average reads per library | 28,276,006 | 42,715,214 | ||
| Detected genes (two or more normalized reads) | 22,654 | 24,841 | ||
| Genes common to both species | 14,765 | |||
| Common and with unique Arabidopsis Genome Initiative identifiers | 10,781 | |||