Table 1. SPF-family transcript expression in the dorsal gland of Cynops pyrrhoghaster, ranked according to reads per kilobase per million (RPKM) values.
Name | Gene length | RPKM | % RPKM | Unique gene reads | Total gene reads |
---|---|---|---|---|---|
CyPy_SPF_1 | 753 | 458.927 | 34,41 | 5.913.474 | 6.084.698 |
CyPy_SPF_2 | 833 | 241.603 | 18,11 | 3.543.589 | 3.543.634 |
CyPy_SPF_3 | 738 | 142.199 | 10,66 | 786.539 | 1.847.790 |
CyPy_SPF_4 | 737 | 132.387 | 9,93 | 1.668.229 | 1.717.963 |
CyPy_SPF_5 | 734 | 60.250 | 4,52 | 344.312 | 778.674 |
CyPy_SPF_6 | 686 | 52.026 | 3,90 | 612.800 | 628.411 |
CyPy_SPF_7 | 662 | 41.813 | 3,13 | 232.970 | 487.380 |
CyPy_SPF_8 | 751 | 35.040 | 2,63 | 190.772 | 463.342 |
CyPy_SPF_9 | 743 | 32.691 | 2,45 | 244.395 | 427.685 |
CyPy_SPF_10 | 706 | 28.199 | 2,11 | 288.031 | 350.547 |
CyPy_SPF_11 | 520 | 16.174 | 1,21 | 127.386 | 148.092 |
CyPy_SPF_12 | 687 | 13.107 | 0,98 | 89.451 | 158.550 |
CyPy_SPF_13 | 718 | 12.924 | 0,97 | 91.112 | 163.385 |
CyPy_SPF_14 | 718 | 10.545 | 0,79 | 108.983 | 133.310 |
CyPy_SPF_15 | 720 | 9.150 | 0,69 | 103.095 | 115.999 |
CyPy_SPF_16 | 661 | 8.514 | 0,64 | 82.660 | 99.091 |
CyPy_SPF_17 | 677 | 8.237 | 0,62 | 83.855 | 98.193 |
CyPy_SPF_18 | 662 | 7.877 | 0,59 | 51.851 | 91.813 |
CyPy_SPF_19 | 673 | 6.641 | 0,50 | 66.292 | 78.696 |
CyPy_SPF_20 | 675 | 6.320 | 0,47 | 37.831 | 75.111 |
CyPy_SPF_21 | 684 | 3.033 | 0,23 | 18.493 | 36.528 |
CyPy_SPF_22 | 757 | 2.776 | 0,21 | 23.431 | 37.005 |
CyPy_SPF_23 | 668 | 1.467 | 0,11 | 7.402 | 17.255 |
CyPy_SPF_24 | 770 | 1.088 | 0,08 | 9.425 | 14.745 |
CyPy_SPF_25 | 685 | 778 | 0,06 | 4.664 | 9.384 |
Transcript 3 and 5 are sodefrin transcripts, i.e. transcripts that contain an insertion leading to a frame shift from which a peptide pheromone can be cleaved, while all remaining are SPF transcripts.