Table 3. Top 20 markers contributing segregation in Fig. 2.
| Top 20 markers on PC1 (segregation of AA from OF and OA groups) | ||||
|---|---|---|---|---|
| Marker | LG | Position (cM) | PC1 | BLAST |
| 3971_540 | 3 | 49.378 | −0.046 | Putative cysteine-rich receptor-like |
| 9820_93 | U | U | −0.045 | NADH dehydrogenase |
| 6740_1395 | 4 | 55.018 | −0.045 | PP |
| 31101_1669 | 3 | 75.576 | 0.045 | Dihydrolipoyl dehydrogenase-like |
| 41898_129 | 4 | 86.787 | 0.044 | Succinate dehydrogenase |
| 41898_187 | U | U | −0.044 | Succinate dehydrogenase |
| 50733_606 | 4 | 86.698 | 0.044 | Succinate dehydrogenase |
| 40643_1058 | U | U | 0.044 | PP |
| 6714_511 | U | U | 0.043 | PP |
| 6714_306 | 1 | 34.656 | −0.043 | PP |
| 37377_605 | 1 | 44.526 | −0.043 | Farnesyl pyrophosphate synthetase |
| 17343_359 | U | U | 0.042 | Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a |
| 41281_366 | U | U | 0.042 | Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like |
| 6714_427 | 1 | 35.182 | 0.042 | PP |
| 50733_452 | U | U | 0.042 | Succinate dehydrogenase |
| 6740_966 | 4 | 54.881 | −0.042 | PP |
| 50733_371 | 4 | 87.261 | 0.042 | Succinate dehydrogenase |
| 6855_1933 | 1 | 36.296 | −0.041 | Hexokinase 5 |
| 7244_936 | U | U | −0.041 | Probable polygalacturonase-like |
| 41366_306 | 4 | 105.346 | −0.041 | Peptidyl-prolyl cis-trans isomerase h |
| Top 20 markers on PC2 (segregation of AA from OF and OA groups) | ||||
| Marker | LG | Position (cM) | PC2 | BLAST |
| 31527_789 | U | U | −0.057 | Pheophorbide a chloroplastic-like |
| 9552_740 | 7 | 42.603 | 0.056 | Aminoacylase-1-like |
| 13591_172 | U | U | −0.047 | Chloroplast genome |
| 47071_67 | 7 | 47.583 | −0.046 | NA |
| 52864_272 | U | U | −0.045 | Stress Response protein, Nst1 |
| 32698_400 | 6 | 13.684 | 0.045 | Alcohol dehydrogenase class 3 |
| 22583_156 | 6 | 74.525 | −0.045 | Alkaline/neutral invertase |
| 41908_1026 | U | U | 0.043 | Cellulose synthase catalytic subunit 12 |
| 43527_131 | U | U | 0.043 | PP |
| 34965_397 | 4 | 74.959 | −0.041 | Cysteine desulfurase chloroplastic-like |
| 34965_538 | U | U | 0.041 | Cysteine desulfurase chloroplastic-like |
| 40640_795 | U | U | 0.041 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
| 40920_284 | 7 | 48.169 | −0.041 | Trigger factor-like |
| 34965_1344 | 4 | 59.347 | 0.040 | Cysteine desulfurase chloroplastic-like |
| 8982_1259 | 6 | 62 | −0.040 | Acetolactate synthase amino acid binding protein |
| 13979_375 | U | U | 0.040 | Cyclin-like f-box |
| 32206_1218 | 7 | 23.072 | −0.040 | Enolase 1-like |
| 53366_177 | U | U | −0.040 | Cyclin-like f-box |
| 7528_1208 | 7 | 43.297 | 0.039 | Auxin response factor 7b |
| 6762_1533 | U | U | −0.039 | 2-oxoglutarate/malate translocator |
PP–predicted protein. U–Unmapped. NA- not available.