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. 2016 Jan 6;33(4):1029–1041. doi: 10.1093/molbev/msv346

Table 2.

Primers and Annealing Temperatures Used in Polymerase Chain Reactions to Amplify Partial OPN1SW and OPN1LW Opsin Genes in Treeshrews (Genera: Dendrogale, Ptilocercus, Tupaia) and Woolly Opossum (Genus: Caluromys).

Gene Genus Region Forward (5′ to 3′) Reverse (5′ to 3′) Tanneal°C
OPN1SW Ptilocercus Exon 2 and 3 GCC TAA AGG CTT CAA GCA GGG GG TGC CAC AGG TCT GGT GAT AGG CT 64
Dendrogale Exon 1 GTA CCA CCT TGC CCC TGT CT CCT TTC CCC TGC AGT ACC T 58
Exons 2 and 3 GGT GAT AGG CTG GTC ATT GG CCC AGC AGC TGA GAG TAG GA 60
Exon 4 GCT CAG CAG CAG GAG TCA G TTC ATG AAG CAG TAG ATG ATG G 58
Exon 5 ATG AGG CGT CTT TTC CAC AC TGG CTT TGT TAG CAG GAA GG 60
Tupaia Exon 1 AAG AAC ACA ATC GGC TTT GG GTG GCG TAG TGT CCT TTG CT 58
Exons 2 and 3 CAG CCC AGC CTA GAA GTT TG CCT GAC CCT CTC AAG ACC AC 62
Exon 4 TAA TGA ATA AGG CGG GGT GA CTG ACA AGT CAC TGG CGA GA 58
Exon 5 ATG AGG CGT CTT TTC CAC AC TGG CTT TGT TAG CAG GAA GG 60
Caluromys Exons 1–3 TGT CAG GGG ATG AGG AGT TC GGC CAC ACG AGC ACT GTA 62
OPN1LW Dendrogale, Ptilocercus Exon 3 CAT CAC GGG GCT CTG GTC CTG CTC CAA CCA AAG ATG G 60
Exon 5 AGG CTG AGA AGG AGG TGA CA GTG GCA CTT TTG GCG AAG TA 60
Tupaia Exon 3 TAC CTG TCT GCT CTT CCC TGT AG GGT CCT AAA TGA GCC ACC CTT AC 64
Exon 5 TGC ACT GTC CCT GTC TCA CCC AG GGC CTG CCG ATG GCC TTA CTT AC 68