TABLE 2.
Comparison of Quantitative- and Allelic Methylation Data With Immunohistochemistry Data
| Sample No. | Genotype | Methylation Level (qMSP) | Methylated Allele(s) | Protein Expression | Methylation Level (Standard Pyrosequencing) |
|---|---|---|---|---|---|
| 1050 | CT | Medium | C | Not expressed | No data |
| 1107 | CT | Medium | T | Not expressed | High |
| 1155 | CT | High | T | Not expressed | High |
| 1439 | CT | Medium | C and T | Low | Medium |
| 1518 | CT | High | T | High | High |
| 1650 | CT | Low | C | Low | Low |
| 20 | CT | Low | T | Not expressed | Low |
| 72 | CT | Low | T | High | No methylation |
| 1037 | CC | Low | C | Medium | No methylation |
| 1521 | CC | Low | C | Low | Low |
| 1664 | CC | Low | C | Not expressed | Medium |
| 55 | TT | High | T | Not expressed | Medium |
qMSP, quantitative methylation-specific PCR.