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. 2016 Feb 3;9(Suppl 2):51–79. doi: 10.4137/JEN.S25513

Table 1.

Definitions of key terminology.

TERM DEFINITION
Acetylation The addition of an acetyl group to lysine amino acid residues
Chromatin The DNA molecule in combination with the proteins and RNA bound to it
Epigenetic modifications Stable changes to chromatin structure that do not change the nucleic acid sequence, such as DNA methylation and histone modifications
Epigenetics The study of epigenetic modifications
Fundus photograph Picture of the back of the eye, including the retina, macula, fovea, and optic disk
H3K9me3 Histone modification associated with transcriptionally inactive chromatin: three methyl groups attached to the lysine at amino acid position 9 of histone H3
Histone One of the five proteins that are the primary protein components of chromatin
Heterochromatin Structurally condensed, transcriptionally inactive regions of chromatin
HP1 Heterochromatin protein 1, protein associated with heterochromatin which maintains the heterochromatic state
Methylation The addition of a methyl group to cytosine DNA residues; or the addition of one or more methyl groups to histone lysine or arginine amino acid residues
Optical coherence tomography A method for capturing a cross-sectional image of tissue
Phosphorylation The addition of a phosphoryl group to lysine, threonine, or tyrosine amino acid residues
Pioneering transcription factors Transcription factors which bind to repressed, heterochromatic DNA to facilitate activation of a gene
Transcription factor 1) any protein involved in transcription; 2) sequence-specific DNA binding proteins which facilitate the transcriptional activation or repression of target genes
Ubiquitination The addition of one or more ubiquitin groups to lysine amino acid residues