Table 1.
Summary of E.gracilis RNA-Seq data
Read data (bps) | 9.03G |
Total transcripts (seq) | 113,295 |
FPKM≧1 out of total transcripts (seq) | 49,754 |
Components (seq) | 49,826 |
FPKM≧1 out of components (seq) | 26,479 |
Median (nucl) | 845 |
Contig N50 (nucl) | 1604 |
Max length (nucl) | 21,550 |
GC contents (%) | 63.17 |
Components with SL-sequencea | 14,186/26,479 (53.6 %) |
aCounted sequences from the representing potentially expressed components (26,479 seq) with conserved 12 nucleotides (TATTTTTTTTCG)