Table 2.

Sequencing and peak calling details.

GEO accession	Experiment	Tissue	Total number of reads	Mapped reads	% mapped reads	No. peaks
GSM1598204	FAIRE-seq	Normal	19,147,127	17,986,187	93.94	50
GSM1598205	FAIRE-seq	Normal	21,599,945	19,883,501	92.05	472
GSM1598206	FAIRE-seq	Normal	26,080,719	25,043,481	96.02	61
GSM1598207	FAIRE-seq	Normal	23,167,347	22,177,458	95.73	2837
GSM1598208	FAIRE-seq	Primary	36,827,373	34,441,896	93.52	6450
GSM1598209	FAIRE-seq	Primary	18,306,926	17,002,416	92.87	1579
GSM1598210	FAIRE-seq	Primary	32,197,589	30,568,523	94.94	13,348
GSM1598211	FAIRE-seq	Primary	28,992,853	27,590,961	95.16	2243
GSM1598212	FAIRE-seq	Resistant	37,452,682	35,655,681	95.2	80
GSM1598213	FAIRE-seq	Resistant	28,372,546	26,836,918	94.59	3497
GSM1598214	FAIRE-seq	Resistant	27,545,618	26,061,843	94.61	5754
GSM1598215	FAIRE-seq	Metastasis	39,562,972	37,594,752	95.03	2043
GSM1598216	FAIRE-seq	Metastasis	29,130,845	27,291,106	93.68	281
GSM1598217	FAIRE-seq	Metastasis	27,253,810	25,789,354	94.63	1313
GSM1598218	AR ChIP-seq	Primary	13,782,549	12,232,556	88.75	754
GSM1598219	AR ChIP-seq	Primary	18,146,927	16,009,388	88.22	402
GSM1598220	AR ChIP-seq	Primary	13,040,014	11,254,994	86.31	17,511
GSM1598221	AR ChIP-seq	Primary	9,928,626	7,080,840	71.32	3278
GSM1598222	AR ChIP-seq	Primary	12,243,485	11,160,623	91.16	7932
GSM1598223	AR ChIP-seq	Resistant	16,518,987	14,727,645	89.16	739
GSM1598224	AR ChIP-seq	Resistant	16,382,421	14,441,817	88.15	238
GSM1598225	AR ChIP-seq	Resistant	15,621,538	13,967,477	89.41	1779
GSM1598226	Input	Resistant	28,171,838	26,825,849	95.22
GSM1598227	Input	Metastasis	24,117,145	22,902,755	94.96
GSM1598228	Input	Primary	23,982,305	22,739,491	94.82
GSM1598229	Input	Primary	27,642,177	26,387,234	95.46