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. 2016 Mar 5;17:191. doi: 10.1186/s12864-016-2486-8

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© Williams et al. 2016

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — F. oxysporum f. sp. lycopersici chromosomes highlighting sequence conservation and other features of CDCs in comparison to core chromosomes. The circos plot illustrates the gene-sparse, repeat-rich nature of Fol CDCs and their lower sequence conservation across related species in comparison to core chromosomes. Outer ring-Fol chromosomes highlighting CDCs (red) and chromosomes that are partially dispensable (yellow). Inner rings: (a) gene density in 100 kb windows, (b) repeat density in 100 kb windows, (c) GC content in 50 k bp windows, range 45–55 %, (d) Region of Fol chromosomes overlapped by Fom-5190a sequences, (e) Foc-38-1, (f) Fop-37622, (g) F. oxysporum f. sp. brassica Fo5176, (h) F. oxysporum f. sp. melonis, (i) F. solani, (j) F. fujikuori, (k) F. verticilliodes, (l) F. virguliforme, and (m) F. graminearum