Table 3.
The amino acids identity of the different proteins of China/XJBZ/2015 compared with the reference strains used in this study.
| Lineages | Virus strain | N | P | V | C | M | F | H | L |
|---|---|---|---|---|---|---|---|---|---|
| IV | China/BJ/2014 | 98.9 | 99.6 | 94.6 | 99.4 | 99.1 | 98.7 | 99.5 | 99.5 |
| CH/HNZK/2014 | 99.4 | 98.8 | 94.0 | 98.9 | 99.1 | 98.7 | 99.3 | 99.6 | |
| CH/HNZM/2014 | 99.6 | 99.6 | 95.0 | 100 | 99.1 | 98.5 | 99.7 | 99.5 | |
| CH/HNNY/2014 | 99.6 | 99.8 | 94.6 | 98.9 | 99.1 | 98.5 | 99.2 | 99.1 | |
| China/XJYL/2013 | 99.6 | 99.8 | 94.6 | 100 | 99.1 | 98.7 | 99.5 | 99.8 | |
| Tibet/Bharal/2008 | 98.3 | 96.3 | 99.3 | 93.2 | 98.8 | 97.6 | 98.2 | 98.6 | |
| China/Tib/07 | 98.3 | 96.5 | 100 | 94.4 | 98.8 | 97.6 | 98.2 | 98.6 | |
| China/Tibet/Geg/07-30 | 98.6 | 96.5 | 100 | 94.4 | 98.8 | 97.4 | 98.2 | 98.7 | |
| x11 | 98.3 | — | — | — | 98.2 | 97.6 | 98.2 | — | |
| China/Tibet/0701 | 98.5 | 96.5 | 100 | 94.4 | 98.6 | 97.4 | 98.2 | 98.6 | |
| India/TN/Gingee/2014 | 97.5 | 94.9 | 95.0 | 94.9 | 99.1 | 97.4 | 97.0 | 98.7 | |
| IND/TN/GIN/2014/01 | 97.7 | 95.1 | 95.0 | 94.9 | 99.1 | 97.4 | 97.4 | 98.7 | |
| Sungri/96 | 96.4 | 94.1 | 92.3 | 91.0 | 94.6 | 94.7 | 95.1 | 95.9 | |
| Izatnagar/94 | 97.7 | 97.8 | 96.6 | 97.2 | 98.5 | 98.0 | 97.9 | 98.9 | |
| Ethiopia 2010 | 96.8 | 95.9 | 95.6 | 95.5 | 97.9 | 97.1 | 96.7 | 98.4 | |
| Morocco 2008 | 97.1 | 96.7 | 95.6 | 96.0 | 98.2 | 97.1 | 97.2 | 98.5 | |
| Turkey 2000 | 97.5 | 96.9 | 95.3 | 93.8 | 96.7 | 97.3 | 98.2 | 98.7 | |
| Sungri 1996 MSD | 97.5 | 97.6 | 96.6 | 97.2 | 97.6 | 97.8 | 97.2 | 98.7 | |
|
| |||||||||
| III | Uganda 2012 | 92.4 | 85.7 | 82.6 | 80.8 | 96.1 | 93.4 | 89.5 | 95.2 |
| KN5/2011 | 92.4 | 85.5 | 82.2 | 80.2 | 95.8 | 93.4 | 89.7 | 95.2 | |
| Ethiopia 1994 | 93.7 | 83.9 | 79.5 | 74.6 | 95.8 | 93.8 | 91.0 | 96.0 | |
| DORCAS_87 | 92.2 | — | — | — | — | — | — | — | |
| UAE 1986 | 92.4 | 87.0 | 83.9 | 81.4 | 95.8 | 94.3 | 90.5 | 96.0 | |
| Oman 1983 | 92.2 | 87.0 | 83.9 | 81.4 | 95.8 | 94.1 | 90.5 | 96.1 | |
|
| |||||||||
| II | Nigeria/75/1 | 94.7 | 91.0 | 89.9 | 90.4 | 97.3 | 96.9 | 92.8 | 97.7 |
| Nigeria/75/1 (cell strain) | 94.5 | 91.0 | 89.9 | 90.4 | 97.0 | 96.9 | 92.9 | 97.7 | |
| Ng76/1 | 93.9 | 90.0 | 82.9 | 89.3 | 97.9 | 97.6 | 93.1 | 97.6 | |
| SnDk11I13 | 94.7 | 88.6 | 85.9 | 85.9 | 97.6 | 96.7 | 92.9 | 97.3 | |
| CIV/01P/2009 | 94.5 | 87.8 | 84.9 | 85.3 | 97.0 | 96.7 | 92.3 | 97.3 | |
| Ghana/NK1/2010 | 94.5 | 89.0 | 85.9 | 86.4 | 97.3 | 96.7 | 92.8 | 97.3 | |
|
| |||||||||
| I | E32/1969 | 95.0 | 89.0 | 86.2 | 88.7 | 97.3 | 96.2 | 91.8 | 96.9 |
| ICV89 | 94.1 | 86.4 | 77.9 | 85.3 | 97.0 | 93.6 | 91.0 | 96.5 | |