Table 6.
ABA associated transcripts up regulated in T sugarcane plants, compared to B
| Gene family | gene_id | logFC(Q1/Q2) | PValue | logFC(T/B) | PValue | Description | Relationship with abscisic acid |
|---|---|---|---|---|---|---|---|
| AB2C | c53535_g1_i1 | 0.000 | 1.00E + 00 | 5.712 | 4.91E-02 | ABC transporter C family member 2 | abscisic acid D-glucopyranosyl ester transmembrane transport |
| ABAH2 | c60338_g1_i1 | −0.050 | 1.00E + 00 | 2.701 | 3.56E-02 | Abscisic acid 8′-hydroxylase 2 | abscisic acid catabolic process |
| ABAH3 | c78622_g1_i1 | 0.307 | 8.54E-01 | 2.924 | 9.01E-03 | Abscisic acid 8′-hydroxylase 3 | |
| c78622_g2_i1 | −0.440 | 7.00E-01 | 2.794 | 1.07E-02 | |||
| AI5L3 | c84393_g3_i1 | −1.790 | 9.68E-02 | 3.982 | 5.51E-04 | ABSCISIC ACID-INSENSITIVE 5-like protein 3 | abscisic acid-activated signaling pathway |
| AMO | c101773_g1_i1 | 8.258 | 2.79E-19 | 3.002 | 3.94E-02 | Primary amine oxidase | |
| CDPKU | c64532_g1_i2 | 0.000 | 1.00E + 00 | 10.382 | 1.56E-04 | Calcium-dependent protein kinase 30 | |
| CRK29 | c100815_g2_i1 | 5.974 | 2.54E-07 | 4.499 | 1.04E-02 | Cysteine-rich receptor-like protein kinase 29 | response to abscisic acid |
| c80509_g3_i1 | 0.000 | 1.00E + 00 | 7.704 | 3.33E-03 | |||
| FERON | c86070_g1_i3 | 5.144 | 2.25E-05 | 2.851 | 3.28E-02 | Receptor-like protein kinase FERONIA | abscisic acid-activated signaling pathway |
| c89220_g1_i1 | −0.241 | 9.09E-01 | 2.685 | 2.75E-02 | |||
| GG3 | c67489_g1_i3 | 0.000 | 1.00E + 00 | 6.142 | 2.91E-02 | Guanine nucleotide-binding protein subunit gamma 3 | response to abscisic acid |
| IP5P3 | c103894_g2_i1 | −7.938 | 2.25E-05 | 2.181 | 4.56E-02 | Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 | abscisic acid-activated signaling pathway; response to abscisic acid |
| c91503_g1_i4 | −0.239 | 1.00E + 00 | 1.926 | 2.67E-02 | |||
| IP5PB | c95707_g1_i3 | 2.637 | 1.03E-03 | 2.479 | 1.55E-02 | Type I inositol 1,4,5-trisphosphate 5-phosphatase 11 | response to abscisic acid |
| LPP2 | c101924_g4_i1 | 2.513 | 4.64E-03 | 1.874 | 2.85E-02 | Lipid phosphate phosphatase 2 | abscisic acid-activated signaling pathway |
| LTI65 | c97091_g1_i2 | 12.717 | 3.19E-18 | 4.848 | 1.35E-03 | Low-temperature-induced 65 kDa protein | abscisic acid-activated signaling pathway; |
| MFT | c87994_g2_i6 | 9.022 | 6.69E-08 | 5.653 | 2.18E-02 | Protein MOTHER of FT and TF 1 | response to abscisic acid |
| MPK5 | c83394_g1_i1 | 4.061 | 5.22E-08 | 1.615 | 2.92E-02 | Mitogen-activated protein kinase 5 | abscisic acid-activated signaling pathway |
| NCED1 | c102008_g2_i1 | 2.225 | 4.93E-02 | 3.563 | 2.23E-02 | 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic | abscisic acid biosynthetic process |
| c73153_g1_i1 | 4.064 | 5.24E-01 | 5.300 | 2.15E-03 | |||
| PXG4 | c60264_g1_i1 | 5.998 | 2.19E-02 | 2.708 | 3.13E-02 | Probable peroxygenase 4 | response to abscisic acid |
| PYL2 | c100077_g1_i1 | −9.503 | 3.94E-09 | 6.381 | 1.09E-05 | Abscisic acid receptor PYL2 | abscisic acid binding; |
| VIV1 | c127665_g1_i1 | 0.000 | 1.00E + 00 | 5.318 | 2.48E-02 | Regulatory protein viviparous-1 | abscisic acid-activated signaling pathway |
| Y1571 | c97220_g1_i1 | −0.460 | 7.64E-01 | 3.447 | 5.68E-03 | Probable leucine-rich repeat receptor-like protein kinase At1g35710 | response to abscisic acid |
| c97220_g1_i2 | −1.118 | 2.71E-01 | 3.092 | 2.27E-02 |