Table 2.
Summary of plastid genes present and absent in Hydnora
| Present on Hydnora plastome | Deleted from Hydnora platome |
|
|---|---|---|
| Ribosomal RNA genes | ||
| rrn4.5 | ||
| rrn5 | ||
| rrn16 | ||
| rrn23 | ||
| Transfer RNA genes | ||
| trnE-UUC | trnA-UGC | trnP-UGG |
| trnfM-CAU | trnC-GCA | trnQ-UUG |
| trnI-CAU | trnD-GUC | trnR-ACG |
| trnF-GAA | trnR-UCU | |
| trnG-GCC | trnS-GCU | |
| trnH-GUG | trnS-GGA | |
| trnI-GAU | trnS-UGA | |
| trnK-UUU | trnT-GGU | |
| trnL-CAA | trnT-UGU | |
| trnL-UAA | trnV-GAC | |
| trnL-UAG | trnV-UAC | |
| trnM-CAU | trnW-CCA | |
| trnN-GUU | trnY-GUA | |
| Ribosomal protein genes | ||
| rpl2 | rpl20 | |
| rpl14 | rpl22 | |
| rpl16 | rpl23 | |
| rpl36 | rpl32 | |
| rps2 | rpl33 | |
| rps3 | rps15 | |
| rps4 | rps16 | |
| rps7 | ||
| rps8 | ||
| rps11 | ||
| rps12 | ||
| rps14 | ||
| rps18 | ||
| rps19 | ||
| Other genes | ||
| accD | clpP | |
| ycf1 | matK | |
| ycf2 | ycf15 | |
| ycf3 | ||
| ycf4 | ||
| RNA polymerase | ||
| rpoA | ||
| rpoB | ||
| rpoC1 | ||
| rpoC2 | ||
| Photosynthetic and chlororespiratory genes | ||
| atpB | infA | |
| atpE | ccsA | |
| atpF | cemA | |
| atpH | psaA | |
| atpI | psaB | |
| petA | psaC | |
| petB | psaI | |
| petD | psaJ | |
| petG | psbA | |
| petL | psbB | |
| petN | psbC | |
| ndhA | psbD | |
| ndhB | psbE | |
| ndhC | psbF | |
| ndhD | psbH | |
| ndhE | psbI | |
| ndhF | psbJ | |
| ndhG | psbK | |
| ndhH | psbL | |
| ndhI | psbM | |
| ndhJ | psbN | |
| ndhK | psbT | |
| rbcL | psbZ | |
Plastid genes residing on the mitochondrial genome as pseudogenes are indicated in bold.