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. 2016 Mar 7;6:22248. doi: 10.1038/srep22248

Table 3. Summary of models.

Flow term Fit Inline graphic? Intercept Inline graphic Inline graphic d.f. Log lik. Inline graphic AIC
undirected yes −4.5 2.21 1.36 8 −999.8 0.0
directed yes −4.7 1.94 1.52 8 −1017.9 36.3
internal yes −4.0 2.20 1.42 8 −1005.4 11.3
internal no −3.8 2.17 1.40 7 −1005.6 9.7
none no −3.9 2.16 1.82 6 −1012.1 20.6

The models chiefly differ by how contact is assumed to depend on flows. In the null model, denoted by none, contact was independent of flows. In the internal model, contact was a function of within-state flows. In the directed model, contact was a function of flows moving into a state and within-state flows. In the undirected model, contact was a function of within-state flows and both flows into and out of a state. The column “Fit Inline graphic?” indicates whether we estimated the value of Inline graphic, which corresponds to risk that is independent of the number of infective farms. The symbol Inline graphic denotes the dispersion parameter of the negative binomial response. The symbol Inline graphic denotes the standard deviation of the random effect of (geographic) state on transmission rates. The abbreviation d.f. is for degrees of freedom (i.e., the number of parameters estimated). Inline graphicAIC gives the AIC (Akaike information criteria) of a model minus the lowest AIC of all models.