Table 2.
HCV-associated cellular proteins identified by MS and selected for follow-up studies
No. | Identifier | Gene name | Protein name | Log (e) | No. of spectra | Molecular mass, kDa | Gel slice |
1 | ENSP00000351416 | ANKRD17 | Ankyrin repeat domain 17 | −54.9 | 9 | 274.1 | A |
2 | ENSP00000448366 | SCYL2 | SCY1-like 2 | −18.1 | 3 | 77 | A |
3 | ENSP00000392423 | RELN | Reelin | −7.9 | 3 | 388.1 | A |
4 | ENSP00000376899 | PTGFRN | Prostaglandin F2 receptor inhibitor | −54.3 | 12 | 98.5 | B |
5 | ENSP00000295598 | ATP1A1 | ATPase, Na+/K+ transporting, alpha-1 polypeptide | −27.4 | 5 | 112.8 | B |
6 | ENSP00000316032 | NUP98 | Nucleoporin 98kDa | −17.3 | 6 | 195.7 | B |
7 | ENSP00000367122 | SLC3A2 | Solute carrier family 3, member 2 | −23.8 | 4 | 68 | C |
8 | ENSP00000264883 | NUP54 | Nucleoporin 54 kDa | −14.3 | 6 | 55.4 | C |
9 | ENSP00000387282 | AGFG1 | ArfGAP with FG repeats 1 | −7.7 | 3 | 60.7 | C |
10 | ENSP00000260130 | SDCBP | Syndecan binding protein (syntenin) | −10.7 | 3 | 32.4 | E |
11 | ENSP00000221566 | SGTA | Small glutamine-rich tetratricopeptide repeat-containing, alpha | −10.3 | 3 | 34 | E |
12 | ENSP00000227525 | TMEM109 | Transmembrane protein 109 | −35.2 | 15 | 26.2 | G |
ArfGAP, GTP-ase activating protein for ADP-ribosylation factors; FG, Phe-Gly.