Step 1 – Adjust the input | |||
Adjusted input = Raw Ct(input) - Log2(fraction of total chromatin) | |||
Raw Ct | input from total chromatin | Log210 | |
Input | 29.5 | 10% | 3.32 |
Adjusted input = 29.5 – 3.32 = 26.18 | |||
Step 2 - % of input calculations | |||
Sample | Raw Ct | Ct(adjusted input) –Ct(sample) | 2 Ct(adjusted input) –Ct(sample) *100% |
Input | 26.18 | ||
ChIP-Ab | 31.45 | -5.27 | 2.59 |
No-Ab | 34.5 | -8.32 | 0.31 |