Table 2.

Simple sequence repeats in A. sinensis chloroplast genome.

cpSSR ID	Repeat motif	Length (bp)	Start	End	Region	Annotation
1	(A)10	10	1883	1892	LSC
2	(T)10	10	2023	2032	LSC
3	(A)12	12	4127	4138	LSC
4	(A)12	12	4803	4814	LSC
5	(C)10	10	5260	5269	LSC
6	(A)10	10	6662	6671	LSC
7	(A)15	15	7644	7658	LSC
8	(A)11	11	8033	8043	LSC
9	(T)11	11	8380	8390	LSC
10	(T)11	11	9080	9090	LSC
11	(T)10	10	9863	9872	LSC
12	(TA)6	12	10743	10754	LSC
13	(A)10	10	13927	13936	LSC
14	(T)10	10	14100	14109	LSC
15	(TC)7	14	17620	17633	LSC
16	(T)11	11	18009	18019	LSC	rpoC2
17	(T)10	10	19917	19926	LSC	rpoC2
18	(T)10	10	27649	27658	LSC	rpoB
19	(T)10	10	30717	30726	LSC
20	(A)10	10	32194	32203	LSC
21	(T)10	10	44610	44619	LSC
22	(A)10	10	45233	45242	LSC
23	(A)10	10	47349	47358	LSC
24	(A)11	11	47627	47637	LSC
25	(T)10	10	48204	48213	LSC
26	(T)12	12	51015	51026	LSC
27	(T)11	11	51316	51326	LSC
28	(T)10	10	51846	51855	LSC
29	(A)11	11	61867	61877	LSC
30	(T)11	11	62016	62026	LSC
31	(A)11	11	62578	62588	LSC
32	(TA)6	12	62964	62975	LSC
33	(T)10	10	64002	64011	LSC	psbF
34	(C)10	10	66343	66352	LSC
35	(T)12	12	67133	67144	LSC	cemA
36	(T)11	11	71791	71801	LSC
37	(TA)6	12	77233	77244	LSC	psbN
38	(T)15	15	87280	87294	LSC	rps19
39	(TA)7	14	113802	113815	SSC
40	(A)10	10	116349	116358	SSC
41	(A)10	10	116494	116503	SSC
42	(T)10	10	117050	117059	SSC
43	(AT)7	14	117644	117657	SSC
44	(T)10	10	129560	129569	SSC	ycf1*
45	(T)13	13	132293	132305	SSC	ycf1

^*Duplicated gene.