Table 4.
Type | Organism name | Data source | Number of BLAST hit | |
---|---|---|---|---|
ICL | MS | |||
Coral | Acropora digitifera | Genome | 1 | 2 |
Acropora millepora | ESTs | 1 | 2 | |
Montastrea faveolata | ESTs | 3 | 1 | |
Porites astreoides | ESTs | 2 | 2 | |
Sea anemone | Aiptasia pallida | ESTs | 1 | 2 |
Anemonia viridis | ESTs | 1 | 0 | |
Nematostella vectensis | Genome | 1 | 2 | |
Sea slug | Elysia chlorotica | SRA | 0 | 0 |
Sponge | Amphimedon quennslandica | Genome | 0 | 0 |
Leucosolenia complicata | Genome | 11 | 2 | |
Oscarella carmela | Genome | 0 | 0 | |
Sycon ciliatum | Genome | 2 | 0 |
1. ICL and MS sequences from Saccharomyces cerevisiae were used as representitive sequences (queries).
2. When searching in EST database, tblastn was used and thresholds were set: e-value < 1e-15; bitscore > 100.
3. When searching in SRA database, tblastn was used first. Reads may affiliate with query sequences were recovered and subjected into blastn search against to nr/nt database. In blastn search, reads shared high identities and coverages to bacterial subjects will be excluded.