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. 2016 Mar 8;7:251. doi: 10.3389/fmicb.2016.00251

Table 4.

Glyoxylate cycle enzymes (ICL and MS) in selected marine invertebrates.

Type Organism name Data source Number of BLAST hit
ICL MS
Coral Acropora digitifera Genome 1 2
Acropora millepora ESTs 1 2
Montastrea faveolata ESTs 3 1
Porites astreoides ESTs 2 2
Sea anemone Aiptasia pallida ESTs 1 2
Anemonia viridis ESTs 1 0
Nematostella vectensis Genome 1 2
Sea slug Elysia chlorotica SRA 0 0
Sponge Amphimedon quennslandica Genome 0 0
Leucosolenia complicata Genome 11 2
Oscarella carmela Genome 0 0
Sycon ciliatum Genome 2 0

1. ICL and MS sequences from Saccharomyces cerevisiae were used as representitive sequences (queries).

2. When searching in EST database, tblastn was used and thresholds were set: e-value < 1e-15; bitscore > 100.

3. When searching in SRA database, tblastn was used first. Reads may affiliate with query sequences were recovered and subjected into blastn search against to nr/nt database. In blastn search, reads shared high identities and coverages to bacterial subjects will be excluded.