Subject area	Proteomics
More specific subject area	Plant proteomics
Type of data	LC-ESI MS/MS data tables and electron microscopy images
How data was acquired	Raw data by nanoUHLPC-MS/MS and ESEM.
Processed MS/MS data by sequence database searching.
Data format	Mascot.mgf files, also deposited as MS/MS raw files
Experimental factors	Trichomes were isolated from frozen leaves of Artemisia annua cultivar Artemis. Proteins were extracted and digested from trichome-enriched, trichome-depleted and whole leaf samples.
Experimental features	NanoUHPLC-MS/MS-based proteomics was applied to the analysis of trichome-enriched, trichome-depleted and whole leaf samples of Artemisia annua. Protein identification searches were performed against genomic and proteomic sequence databases for comparison of results using Mascot Daemon software. Obtained emPAI values were used for quantitative protein abundance comparisons.
Data source location	EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1 SD, UK and Department of Chemistry, University of Reading, Reading, Berkshire, RG6 6AD, UK
Data accessibility	Via the PRIDE (Proteomics Identifications Database) repository at the European Bioinformatics Institute (http://www.ebi.ac.uk/pride/), PXD000703.