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. 2016 Mar 8;12:75. doi: 10.1007/s11306-016-1002-0

Table 1.

Arginine Biosynthesis metabolites identified from planktonic and biofilm data sets

Peak number Metabolite Elemental formula KEGG IDa Metabolite codeb Mass [M–H] (Da) Rct (sec) Log2 fold changed
2782 Aspartate C4H7NO4 C00049 HRMSPL1 132.0302 749.1 1.577
2873 Glutamate C5H9NO4 C00025 HRMSa1 Rta 146.0458 725.7 1.0159
2981 Glutamine C5H10N2O3 C00064 HRMSa1 Rta 145.0618 781.3 n/a(e)
3171 Citrulline C6H13N3O3 C00327 HRMSa1 Rta 174.0884 813.1 3.5413
3252 N-Acetyl-l-glutamate C7H11NO5 C00624 HRMSa1 Rta 188.0564 691.1 4.3654
3505 l-Arginosuccinate C10H18N4O6 C03406 HRMSPL1 289.1156 800.5 n/af
3608 N-Acetyl-l-citrulline C8H15N3O4 C15532 HRMSPL1 216.099 594.1 5.049
3636 N-Acetyl-ornithine C7H14N2O3 C00437 HRMSa1 Rta 173.0931 791.2 1.068
3838 Arginine C6H14N4O2 C00062 HRMSPL1 173.1044 1304.1 1.3781

aSee reference Kanehisa and Goto 2000

bSee reference Sumner et al. 2014

cRetention time

dLog2 fold change in expression of metabolite between planktonic and biofilm data sets

eNot available, fold change unable to be formulated as peak intensities did not significantly change between sample sets

fNot available, fold change unable to be formulated as only detected in the planktonic data set and not in the biofilm data set