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. 2015 Oct 1;4:F1000 Faculty Rev-940. [Version 1] doi: 10.12688/f1000research.6374.1

Figure 3. Simulation of transitions between actin structures.

Figure 3.

( A) Emergence of filopodia-like protrusions from a lamellipodium-like network. Simulations were performed using the Cytosim software. In the top panel, the actin network grows by branched nucleation via the Arp2/3 complex, and a proportion of actin filaments grow longer due to capture of their growing barbed ends by an elongation factor (formin/VASP, green filaments). Actin filaments contact each other by chance due to thermal fluctuations and are stabilized in bundles by crosslinkers (fascin). In the bottom panel, the presence of elongation factors in the simulation is essential for the emergence of protrusions (left), while the crosslinkers are necessary to group the protrusions into one rigid bundle (right). ( B) Transition between lamellipodium-like and stress fiber-like networks. Simulations were performed using the Cytosim software. In the top panel, a branched network is formed and moved towards friction points (mimicking focal adhesions nucleating dorsal fibers) associated with parallel filaments. In the contact zone, the action of crosslinkers and myosins induces the disassembly of the branched network leading to the formation of a contractile structure of anti-parallel filaments. This structure is further compacted by a slow vertical flow (~centripetal actin flow) until it co-aligns with the friction points to form one contractile fiber. In the bottom panel, in the absence of motors, the network has no tension and is thus highly curved and spread (left). The crosslinkers are essential to maintain the connectivity between the filaments and form a continuous actin structure (middle). The friction points are essential to keep the network elongated at a given length, otherwise the network collapses to one point in the middle due to the tension (right). t i and t f indicate initial time and final time of simulations (empirical).