TABLE 5.
Summary of 13 major animal or human E. coli sequence type studies conducted after 2000
| Author | Yr | Country | Sample origin (no.) | Most common serotype (%) | Dominant ST | ST131 (no.) | ST10 (no.) | ST58/ST155 (no.) | Reference |
|---|---|---|---|---|---|---|---|---|---|
| Overdevest et al. | 2009 | Netherlands | Chicken meat (89), beef (85), pork (57), mixed meat (22), other meat (9) | Chicken (CTX-M-1; 58.1), all other meat (CTX-M-1; 62.5) | ST117, ST10 | Not found | Found | ST155 | 35 |
| Ma et al. | 2006 | China | Duck feces (230), water (15) | CTX-M-27/55/24/105/14 (27.7/22/21.1/16.2/12.2) | NA | NA | NA | NA | 36 |
| Dierikx et al. | 2009 | Denmark | Broiler feces (1,066), farmer's feces (18) | CTX-M-1, CMY-2, SHV-12 | ST93 | Not found | Not found | Not found | 37 |
| Rashid et al. | 2010 | Bangladesh | OBSa feces (170), water (8) | CTX-M-15 (100) | ST156 | Not found | ST10CC (1) | Not found | 28 |
| Hernandez et al. | 2009 | Chile | Gull feces (370), human feces (49) | CTX-M group 1 (94.6) | ST10 | Not found | ST10 (24) | ST58 (4), ST155 (1) | 30 |
| Bergeron et al. | 2005–2007 | Canada | Human urine (475), meat of chicken (253), beef (242), pork (242), animal feces (349) | NAb | ST117, ST10 | Not found | ST10(13) | Not found | 38 |
| Blaak et al. | 2011 | Netherlands | Flies (87), poultry manure in broiler farm (10), laying-hen farm (10) | SHV-12, CTX-M-1, TEM-52 | ST58, ST10 | Not found | ST10 (4) | ST58 (6), ST155 (2) | 39 |
| Cortes et al. | 2003 | Spain | Floor of poultry (59) and pig (27) farms | Poultry, CTX-M-9 group (64.9) and CTX-M-1 group (5.3); pig, CTX-M-1 group (69.0) | ST155, ST10 | ST131 (1) | ST10 (3) | ST155 (4) | 40 |
| Peirano et al. | 2000–2010 | Canada | Human blood (4,698) | CTX-M-15, 119 (60); CTX-M-14, 58 (29) | ST131 | ST131 (117) | ST10CC (13) | Not found | 41 |
| Leverstein-van Hall et al. | 2006–2010 | Netherlands | Chicken meat (98), floor of poultry farm (35), human (516) | Poultry, CTX-M-1 (49); chicken meat, CTX-M-1 (49); human, CTX-M-1 (24) | ST10, ST58 | Not found | Human (3), meat (4) | Human, ST58 (3) | 42 |
| Hu et al. | 2010–2013 | China | Swine feces (31), water (26), human urine, blood, sputum, and body secretion (82) | CTX-M-1 group (33), CTX-M-9 (99) | ST131, CC10 | ST131 (20) | CC10 (19) | NA | 43 |
| Ding et al. | 2006–2007 | China | Pig tissue (81) | NA | CC10 | Not found | CC10 (26) | CC58 (8) | 44 |
| Borjesson et al. | 2010 | Sweden | Broiler feces (10) | CTX-M-1 (10) | ST155 | Not found | Not found | ST155 (3) | 45 |
a
OBS, open bill stork (Anastomus oscitans).
b
NA, not applicable.