Table 1.
Number of SNPs on each chromosome arm identified by GBS analysis
| Chromosome arm | Number of SNPs in the RIL population | Number of SNPs in JWC |
|---|---|---|
| 1AS | 2,128 | 1,487 |
| 1AL | 2,436 | 2,149 |
| 1BS | 3,203 | 1,769 |
| 1BL | 2,464 | 1,883 |
| 1DS | 759 | 728 |
| 1DL | 464 | 474 |
| 2AS | 3,487 | 2,916 |
| 2AL | 3,792 | 2,957 |
| 2BS | 2,552 | 3,202 |
| 2BL | 3,848 | 3,898 |
| 2DS | 754 | 653 |
| 2DL | 798 | 815 |
| 3AS | 1,373 | 923 |
| 3AL | 1,661 | 1,365 |
| 3B | 10,653 | 8,575 |
| 3DS | 197 | 240 |
| 3DL | 367 | 393 |
| 4AS | 2,931 | 2,342 |
| 4AL | 3,667 | 3,084 |
| 4BS | 1,913 | 1,316 |
| 4BL | 1,443 | 1,142 |
| 4DS | 611 | 561 |
| 4DL | 855 | 786 |
| 5AS | 1,442 | 626 |
| 5AL | 1,710 | 1,322 |
| 5BS | 2,254 | 1,869 |
| 5BL | 5,198 | 4,522 |
| 5DS | 638 | 646 |
| 5DL | 779 | 854 |
| 6AS | 2,059 | 1,698 |
| 6AL | 2,197 | 1,624 |
| 6BS | 1,445 | 1,603 |
| 6BL | 2,243 | 2,178 |
| 6DS | 554 | 571 |
| 6DL | 855 | 827 |
| 7AS | 1,621 | 1,362 |
| 7AL | 1,726 | 1,586 |
| 7BS | 1,844 | 1,188 |
| 7BL | 2,173 | 1,664 |
| 7DS | 752 | 722 |
| 7DL | 962 | 857 |
|
| ||
| Total | 82,808 | 69,377 |
|
| ||
| A genome | 32,230 | 25,441 |
|
| ||
| B genome | 41,233 | 34,809 |
|
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| D genome | 9,345 | 9,127 |