Table 4.
Reference gene primer sequences and amplicon characteristics.
Gene symbol | Gene description | Forward primer sequences (5′–3′) | Reverse primer sequences (5′–3′) | Amplicon Length (bp) | Tm (°C) | PCR efficiency (%) | Regression Coefficient (R2) | Mean of Cq value | References |
---|---|---|---|---|---|---|---|---|---|
Actin | Actin related protein 2 | TAAGAACGATAAGTGCCCACATAG | TTTTAGACATCAGCCATAACAGAGT | 201 | 62.1 | 122.7 | 0.992 | 27.76 ± 1.32 | Fu et al., 2013 |
EF-1α | Elongation factor 1 alpha | TGCCGTTGGGGTGAGTATT | CCTTCTTTTCCTCCTCGGTCT | 179 | 57 | 109.3 | 0.995 | 22.97 ± 1.35 | |
PP2A | Protein phosphatase 2A | CGTGGGTCCTCAGAATCAAA | TGTCAGCCATCTGTAAAATG | 297 | 55.1 | 93.6 | 0.994 | 25.24 ± 1.15 | Hong and Dai, 2015 |
SAND | SAND family protein | CGTTGCTCACTACGAGTTCAC | GCAGATGGGTCAACAGGTAA | 178 | 62.1 | 124.0 | 0.995 | 26.04 ± 1.08 | Fu et al., 2013 |
MTP | Protein degradation | GGTGTTATGATTGGTGCTGCT | ATCTATCTCTCGTGGGGTGCT | 184 | 57.2 | 131.6 | 0.995 | 25.11 ± 1.29 | Fu et al., 2013 |
PGK | Phosphoglycerate kinase | ATACCTAATGGACGAAGAGA | TTATTGTCGTCTTTACTACCA | 248 | 64.1 | 113.5 | 0.999 | 27.54 ± 1.19 | Fu et al., 2013 |
TUB | beta tubulin | ATCAACTACCAGCCACCAAC | GAACTCACCTTCCTCCATACC | 211 | 58 | 107.9 | 0.990 | 22.09 ± 1.28 | |
UBQ | ubiquitin extension protein | GAACCATCCACGAACAATACAAGAGC | CAGGCTAAGAGGAGGGATGC | 283 | 56.2 | 110.7 | 0.999 | 19.29 ± 1.20 | |
F-box | F-box protein | CTGCTTTATGTATCGGAGGGA | AACGAAAACGAGAGGGGCT | 246 | 58.3 | 95.9 | 0.995 | 23.15 ± 1.30 |