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. 2016 Mar 11;7:287. doi: 10.3389/fpls.2016.00287

Table 4.

Reference gene primer sequences and amplicon characteristics.

Gene symbol Gene description Forward primer sequences (5′–3′) Reverse primer sequences (5′–3′) Amplicon Length (bp) Tm (°C) PCR efficiency (%) Regression Coefficient (R2) Mean of Cq value References
Actin Actin related protein 2 TAAGAACGATAAGTGCCCACATAG TTTTAGACATCAGCCATAACAGAGT 201 62.1 122.7 0.992 27.76 ± 1.32 Fu et al., 2013
EF-1α Elongation factor 1 alpha TGCCGTTGGGGTGAGTATT CCTTCTTTTCCTCCTCGGTCT 179 57 109.3 0.995 22.97 ± 1.35
PP2A Protein phosphatase 2A CGTGGGTCCTCAGAATCAAA TGTCAGCCATCTGTAAAATG 297 55.1 93.6 0.994 25.24 ± 1.15 Hong and Dai, 2015
SAND SAND family protein CGTTGCTCACTACGAGTTCAC GCAGATGGGTCAACAGGTAA 178 62.1 124.0 0.995 26.04 ± 1.08 Fu et al., 2013
MTP Protein degradation GGTGTTATGATTGGTGCTGCT ATCTATCTCTCGTGGGGTGCT 184 57.2 131.6 0.995 25.11 ± 1.29 Fu et al., 2013
PGK Phosphoglycerate kinase ATACCTAATGGACGAAGAGA TTATTGTCGTCTTTACTACCA 248 64.1 113.5 0.999 27.54 ± 1.19 Fu et al., 2013
TUB beta tubulin ATCAACTACCAGCCACCAAC GAACTCACCTTCCTCCATACC 211 58 107.9 0.990 22.09 ± 1.28
UBQ ubiquitin extension protein GAACCATCCACGAACAATACAAGAGC CAGGCTAAGAGGAGGGATGC 283 56.2 110.7 0.999 19.29 ± 1.20
F-box F-box protein CTGCTTTATGTATCGGAGGGA AACGAAAACGAGAGGGGCT 246 58.3 95.9 0.995 23.15 ± 1.30