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. 2016 Jan 5;291(11):5913–5925. doi: 10.1074/jbc.M115.687566

TABLE 1.

Primers, plasmids, and DNA fragments used in this study

Restriction and mutated sites are shown in italic type and underlined, respectively.

Name Sequence (5′–3′) Product (plasmid or DNA fragment)
5PGN1349M16 ATGACTGTGCATGCACAAAAGATCA pTrcHis2TOPO-PGN1349
3PGN1349-K759B TTTCTTCAGGTGTTTGGCGAAGAAACC pTrcHis2TOPO-PGN1349
5PGN1542-L6Bam AAAAAAGGATCCCTACAGATCATCATACTGCT pQE60-PGN1542
3PGN1542-E279Bam AGATCTGGATCCTTCTACCTGAGATTCGATGT pQE60-PGN1542
5PGN1878-I6Bgl AAGCATAGATCTATTATTATCATCTAATGTAGT pQE60-PGN1878
3PGN1878-L473Bgl AGATCTAGATCTAAGACTATCCAGGAAGGAGC pQE60-PGN1878
5PGN1349-N102 AATGTGGAGCAGATGGGCTTCAGCCT pTrcHis2TOPO-PGN1349-N102
3pTrcHisTopo-L-1 AAGGGCCATGGTTTATTCCTCCTTAT pTrcHis2TOPO-PGN1349-N102
5PGN1349-S615A GCCCACGGTGGTTATGCCACGCTGAT pTrcHis2TOPO-PGN1349-S615A
3PGN1349-A614 GGCACCGTATATGGCGATCCTGTCGG pTrcHis2TOPO-PGN1349-N102-S615A
1349-5F1 ATAATCACCCAACAAAATACCAAGT PGN1349 5′ region with cepA anchor
cep-comp-1349-5R TGCTTCACACCATGGATATGATCATGTAGTCCTTC PGN1349 5′ region with cepA anchor
1349-5F1-cepF ATCATATCCATGGTGAAGCATCTTCGATGCTG cepA with 5PGN1349 anchor
1349-3Fcomp-cep3R-comp ATTGTTTTTGTTCCGATAGTGATAGTGAACGG cepA with 5PGN1349 anchor
cep-3F-1349-3F1 TCACTATCGGAACAAAAACAATCCGCAGATCTTCGA 5PGN1349 3′ region with cepA anchor
1349-3Rcomp GCTTTCAGCCTTATATCCTCCGGCTTA 5PGN1349 3′ region with cepA anchor
1349-5F2 ATGACTGTGCATGCACAAAAGATCA 5PGN1349-cepA
1349-3R2comp TTTCTTCAGGTGTTTGGCGAAGAAACC 5PGN1349-cepA