TABLE 1.
Primers, plasmids, and DNA fragments used in this study
Restriction and mutated sites are shown in italic type and underlined, respectively.
| Name | Sequence (5′–3′) | Product (plasmid or DNA fragment) |
|---|---|---|
| 5PGN1349M16 | ATGACTGTGCATGCACAAAAGATCA | pTrcHis2TOPO-PGN1349 |
| 3PGN1349-K759B | TTTCTTCAGGTGTTTGGCGAAGAAACC | pTrcHis2TOPO-PGN1349 |
| 5PGN1542-L6Bam | AAAAAAGGATCCCTACAGATCATCATACTGCT | pQE60-PGN1542 |
| 3PGN1542-E279Bam | AGATCTGGATCCTTCTACCTGAGATTCGATGT | pQE60-PGN1542 |
| 5PGN1878-I6Bgl | AAGCATAGATCTATTATTATCATCTAATGTAGT | pQE60-PGN1878 |
| 3PGN1878-L473Bgl | AGATCTAGATCTAAGACTATCCAGGAAGGAGC | pQE60-PGN1878 |
| 5PGN1349-N102 | AATGTGGAGCAGATGGGCTTCAGCCT | pTrcHis2TOPO-PGN1349-N102 |
| 3pTrcHisTopo-L-1 | AAGGGCCATGGTTTATTCCTCCTTAT | pTrcHis2TOPO-PGN1349-N102 |
| 5PGN1349-S615A | GCCCACGGTGGTTATGCCACGCTGAT | pTrcHis2TOPO-PGN1349-S615A |
| 3PGN1349-A614 | GGCACCGTATATGGCGATCCTGTCGG | pTrcHis2TOPO-PGN1349-N102-S615A |
| 1349-5F1 | ATAATCACCCAACAAAATACCAAGT | PGN1349 5′ region with cepA anchor |
| cep-comp-1349-5R | TGCTTCACACCATGGATATGATCATGTAGTCCTTC | PGN1349 5′ region with cepA anchor |
| 1349-5F1-cepF | ATCATATCCATGGTGAAGCATCTTCGATGCTG | cepA with 5PGN1349 anchor |
| 1349-3Fcomp-cep3R-comp | ATTGTTTTTGTTCCGATAGTGATAGTGAACGG | cepA with 5PGN1349 anchor |
| cep-3F-1349-3F1 | TCACTATCGGAACAAAAACAATCCGCAGATCTTCGA | 5PGN1349 3′ region with cepA anchor |
| 1349-3Rcomp | GCTTTCAGCCTTATATCCTCCGGCTTA | 5PGN1349 3′ region with cepA anchor |
| 1349-5F2 | ATGACTGTGCATGCACAAAAGATCA | 5PGN1349-cepA |
| 1349-3R2comp | TTTCTTCAGGTGTTTGGCGAAGAAACC | 5PGN1349-cepA |