Table 1. List of noncoding annotations collected for LARVA's analysis.
Feature | Nucleotide | Number | Length mean | Length SD | Fraction |
---|---|---|---|---|---|
Promoter | 89 325 819 | 72 965 | 2500 | 0 | 0.028 |
TF peak | 376 580 899 | 5 710 734 | 632.341 | 434.949 | 0.120 |
DHS site | 434 080 020 | 2 890 742 | 150.162 | 4.520 | 0.138 |
DRM enhancer | 8 273 100 | 9599 | 861.871 | 987.892 | 2.637 × 10−3 |
Ultra-conserved | 126 007 | 481 | 261.969 | 70.477 | 4.020 × 10−5 |
Ultra-sensitive | 610048 | 1354 | 683.149 | 769.190 | 1.945 × 10−4 |
UTR | 41 398 790 | 155 052 | 392.539 | 781.461 | 1.320 × 10−2 |
TSS | 13 615 140 | 196 520 | 100 | 0 | 4.343 × 10−3 |