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. 2015 Dec 9;202(2):411–426. doi: 10.1534/genetics.115.179507

Table 1. Simulation results for MAF = 0.1.

LD Strength Criteria P = 10 P = 100
CA LRR DCRR CA LRR DCRR
ρ=0.2 Strict power 1 1 1 0.91 0.91 0.97
Power 1 1 1 0.982 0.982 0.994
Type 1 0.016 0.014 0.016 0.00032 0.00032 0.0026
Time 16.34 sec 11.79 sec 78.89 sec 2.4 min 0.50 min 6.52 min
ρ=0.4 Strict power 1 1 1 0.93 0.93 0.98
Power 1 1 1 0.984 0.984 0.996
Type 1 0.05 0.036 0.04 0.0022 0.0022 0.0068
Time 16.82 sec 24.20 sec 158.46 sec 2.44 min 0.54 min 6.54 min
ρ=0.6 Strict power 1 0.98 0.99 0.94 0.94 0.99
Power 1 0.996 0.998 0.988 0.988 0.998
Type 1 0.39 0.01 0.02 0.0088 0.0085 0.0195
Time 15.96 sec 13.48 sec 80.45 sec 2.59 min 0.50 min 7.81 min
ρ=0.8 Strict power 1 0.94 0.98 0.94 0.96 0.99
Power 1 0.988 0.996 0.988 0.992 0.998
Type 1 0.99 0.018 0.044 0.0546 0.0287 0.0522
Time 16.17 sec 14.58 sec 79.49 sec 2.6 min 0.59 min 7.12 min
P = 1,000 P = 10,000
ρ=0.2 Strict power 0.74 0.72 0.92 0.37 0.57 0.99
Power 0.944 0.94 0.984 0.832 0.896 0.998
Type 1 0.00004 0.00005 0.0005 0.000007 0.000004 0.00049
Time 48.48 min 35.96 min 73.91 min 95.71 hr 422.41 hr 107.08 hr
ρ=0.4 Strict power 0.68 0.67 0.91 0.40 0.48 0.91
Power 0.93 0.93 0.982 0.836 0.846 0.982
Type 1 0.00003 0.0003 0.0005 0.000004 0.000006 0.0005
Time 47.34 min 33.68 min 69.86 min 97.87 hr 443.53 hr 111.42 hr
ρ=0.6 Strict power 0.77 0.78 0.96 0.39 0.42 0.93
Power 0.95 0.952 0.992 0.834 0.874 0.986
Type 1 0.00016 0.0002 0.001 0.000009 0.00001 0.00051
Time 48.71 min 32.50 min 72.18 min 97.57 hr 420 hr 105 hr
ρ=0.8 Strict power 0.68 0.69 0.89 0.40 0.43 0.93
Power 0.932 0.942 0.978 0.856 0.854 0.986
Type 1 0.0012 0.0011 0.0037 0.00003 0.000036 0.00073
Time 53.02 min 33.55 min 69.52 min 94.93 hr 379.62 hr 64.88 hr