Table 2. Founder effects for the seven simulated QTL using genotypes of the first MAGIC population of mice.
Founder namea | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
QTL | Chr. | Position | A/J | C57BL | 129S1 | NOD | NZO | CAST | PWK | WSB |
QTL-1 | 1 | 41.35 | −0.174 | −0.015 | 0.145 | −0.409 | 0.046 | −0.281 | −0.058 | −0.073 |
QTL-2 | 2 | 21.16 | −0.473 | −0.095 | −0.063 | 0.352 | 0.052 | 0.161 | −0.074 | 0.303 |
QTL-3 | 3 | 58.79 | 0.21 | −0.181 | −0.398 | −0.414 | 0.391 | −0.422 | −0.089 | −0.174 |
QTL-4 | 3 | 65.18 | −0.294 | 0.116 | 0.58 | 0.067 | −0.111 | 0.172 | −0.443 | 0.267 |
QTL-5 | 4 | 27.42 | 0.549 | 0.113 | 0.595 | 0.266 | −0.13 | 0.161 | −0.43 | −0.265 |
QTL-6 | 4 | 41.19 | −0.287 | 0.225 | −0.027 | 0.104 | −0.123 | −0.227 | 0.809 | 0.061 |
QTL-7 | 5 | 28.65 | −0.252 | −0.042 | 0.042 | −0.083 | 0.028 | 0.346 | −0.202 | 0.132 |
Strain names of the 8 founder strains initiating the CC population.