Table 2.
Country | Locations | Code | AR | HO | HE | FIS | P-values | IAM | TPM | SMM |
---|---|---|---|---|---|---|---|---|---|---|
France-Corsica | Figari | Ca1_02 | 4.390 ± 1.311 | 0.534 ± 0.132 | 0.569 ± 0.100 | 0.061 | 0.0961 | 0.082 | 0.633 | 0.981 |
France-Corsica | Figari | Ca1_08 | 4.483 ± 1.583 | 0.573 ± 0.156 | 0.594 ± 0.121 | 0.037 | 0.1998 | 0.010 | 0.285 | 0.850 |
France-Corsica | Figari | Ca1_10 | 4.285 ± 1.188 | 0.582 ± 0.154 | 0.590 ± 0.141 | 0.014 | 0.3648 | 0.005 | 0.024 | 0.935 |
France-Corsica | Figari | Ca1_12 | 4.263 ± 1.310 | 0.574 ± 0.144 | 0.592 ± 0.125 | 0.031 | 0.2372 | 0.019 | 0.150 | 0.590 |
France-Corsica | Porto-Vecchio | Ca2_02 | 4.541 ± 1.481 | 0.552 ± 0.112 | 0.572 ± 0.104 | 0.034 | 0.2074 | 0.082 | 0.633 | 0.976 |
France-Corsica | Porto-Vecchio | Ca2_08 | 4.431 ± 1.512 | 0.555 ± 0.110 | 0.599 ± 0.095 | 0.074 | 0.0440 | 0.010 | 0.180 | 0.850 |
France-Corsica | Bastelicaccia | Ca3_10 | 4.562 ± 1.688 | 0.616 ± 0.218 | 0.603 ± 0.138 | −0.022 | 0.6934 | 0.014 | 0.367 | 0.820 |
France-Corsica | Bastelicaccia | Ca3_12 | 4.568 ± 1.365 | 0.549 ± 0.182 | 0.594 ± 0.159 | 0.077 | 0.0257 | 0.019 | 0.082 | 0.976 |
France-Corsica | San Giuliano | Cb1_02 | 4.240 ± 0.999 | 0.566 ± 0.154 | 0.574 ± 0.129 | 0.014 | 0.4029 | 0.010 | 0.367 | 0.850 |
France-Corsica | San Giuliano | Cb1_08 | 4.476 ± 1.194 | 0.661 ± 0.117 | 0.616 ± 0.087 | −0.075 | 0.9621 | 0.010 | 0.285 | 0.787 |
France-Corsica | San Giuliano | Cb1_10 | 4.293 ± 1.369 | 0.550 ± 0.177 | 0.578 ± 0.116 | 0.050 | 0.1200 | 0.010 | 0.326 | 0.850 |
France-Corsica | Calvi | Cb2_02 | 4.368 ± 1.327 | 0.601 ± 0.150 | 0.611 ± 0.110 | 0.018 | 0.3430 | 0.007 | 0.180 | 0.674 |
France-Corsica | Calvi | Cb2_08 | 4.264 ± 0.979 | 0.523 ± 0.134 | 0.607 ± 0.115 | 0.140 | 0.0040 | 0.002 | 0.150 | 0.820 |
France-Corsica | Moltifao | Cb3_08 | 4.219 ± 1.358 | 0.546 ± 0.120 | 0.603 ± 0.110 | 0.096 | 0.0136 | 0.001 | 0.064 | 0.752 |
France-Corsica | Moltifao | Cb3_10 | 4.121 ± 0.867 | 0.611 ± 0.162 | 0.605 ± 0.131 | −0.010 | 0.5996 | 0.005 | 0.064 | 0.590 |
France-Corsica | Moltifao | Cb3_12 | 4.307 ± 1.330 | 0.568 ± 0.197 | 0.576 ± 0.154 | 0.014 | 0.3401 | 0.064 | 0.410 | 0.850 |
France-Var department | Roquebrune-sur-Argens | V1_06 | 3.680 ± 0.794 | 0.560 ± 0.100 | 0.561 ± 0.082 | 0.103 | 0.0084 | 0.005 | 0.020 | 0.590 |
France-Var department | Roquebrune-sur-Argens | V1_08 | 3.501 ± 0.926 | 0.609 ± 0.112 | 0.584 ± 0.094 | −0.044 | 0.4916 | 0.002 | 0.010 | 0.326 |
France-Var department | Roquebrune-sur-Argens | V1_10 | 3.690 ± 1.366 | 0.603 ± 0.150 | 0.587 ± 0.100 | −0.029 | 0.8393 | 0.001 | 0.005 | 0.213 |
France-Var department | Roquebrune-sur-Argens | V1_12 | 3.566 ± 1.176 | 0.573 ± 0.125 | 0.592 ± 0.091 | 0.033 | 0.7551 | 0.001 | 0.001 | 0.082 |
France-Var department | Roquebrune-sur-Argens | V2_08 | 3.525 ± 0.361 | 0.515 ± 0.131 | 0.556 ± 0.127 | 0.075 | 0.2253 | 0.003 | 0.064 | 0.545 |
France-Var department | Roquebrune-sur-Argens | V2_10 | 3.744 ± 1.091 | 0.596 ± 0.146 | 0.581 ± 0.106 | −0.027 | 0.0492 | 0.003 | 0.014 | 0.367 |
France-Var department | Roquebrune-sur-Argens | V2_12 | 4.031 ± 0.957 | 0.591 ± 0.103 | 0.570 ± 0.093 | −0.038 | 0.8049 | 0.005 | 0.285 | 0.875 |
France-Var department | Bormes-Les-Mimosas | V3_08 | 3.820 ± 1.045 | 0.558 ± 0.147 | 0.572 ± 0.122 | 0.024 | 0.3183 | 0.014 | 0.150 | 0.633 |
France-Var department | Bormes-Les-Mimosas | V3_12 | 4.067 ± 1.045 | 0.519 ± 0.160 | 0.558 ± 0.117 | 0.072 | 0.0619 | 0.005 | 0.410 | 0.981 |
Italy-Sardinia | San Giovanni Suergiu | Sd_12 | 4.513 ± 1.926 | 0.560 ± 0.156 | 0.590 ± 0.143 | 0.052 | 0.0868 | 0.018 | 0.248 | 0.787 |
The allelic richness (AR), observed (HO) and expected (HE) heterozygosity and FIS are presented for each population. AR is based on the minimum sample size of 27 diploid individuals. FIS P-value adjusted at the nominal level (5 %) is 0.0002 after Bonferroni correction. Results of bottleneck tests (P-values) are presented for the Infinite Allele Model (IAM), Two-phase Model (TPM) and Stepwise Mutation Model (SMM)
The number at the end of each sample code corresponds to the collection year
Significant results of bottleneck tests are indicated in bold