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. 2016 Mar 11;9:141. doi: 10.1186/s13071-016-1426-4

Table 2.

Genetic diversity and bottleneck results based on microsatellite data for each sampled site

Country Locations Code AR HO HE FIS P-values IAM TPM SMM
France-Corsica Figari Ca1_02 4.390 ± 1.311 0.534 ± 0.132 0.569 ± 0.100 0.061 0.0961 0.082 0.633 0.981
France-Corsica Figari Ca1_08 4.483 ± 1.583 0.573 ± 0.156 0.594 ± 0.121 0.037 0.1998 0.010 0.285 0.850
France-Corsica Figari Ca1_10 4.285 ± 1.188 0.582 ± 0.154 0.590 ± 0.141 0.014 0.3648 0.005 0.024 0.935
France-Corsica Figari Ca1_12 4.263 ± 1.310 0.574 ± 0.144 0.592 ± 0.125 0.031 0.2372 0.019 0.150 0.590
France-Corsica Porto-Vecchio Ca2_02 4.541 ± 1.481 0.552 ± 0.112 0.572 ± 0.104 0.034 0.2074 0.082 0.633 0.976
France-Corsica Porto-Vecchio Ca2_08 4.431 ± 1.512 0.555 ± 0.110 0.599 ± 0.095 0.074 0.0440 0.010 0.180 0.850
France-Corsica Bastelicaccia Ca3_10 4.562 ± 1.688 0.616 ± 0.218 0.603 ± 0.138 −0.022 0.6934 0.014 0.367 0.820
France-Corsica Bastelicaccia Ca3_12 4.568 ± 1.365 0.549 ± 0.182 0.594 ± 0.159 0.077 0.0257 0.019 0.082 0.976
France-Corsica San Giuliano Cb1_02 4.240 ± 0.999 0.566 ± 0.154 0.574 ± 0.129 0.014 0.4029 0.010 0.367 0.850
France-Corsica San Giuliano Cb1_08 4.476 ± 1.194 0.661 ± 0.117 0.616 ± 0.087 −0.075 0.9621 0.010 0.285 0.787
France-Corsica San Giuliano Cb1_10 4.293 ± 1.369 0.550 ± 0.177 0.578 ± 0.116 0.050 0.1200 0.010 0.326 0.850
France-Corsica Calvi Cb2_02 4.368 ± 1.327 0.601 ± 0.150 0.611 ± 0.110 0.018 0.3430 0.007 0.180 0.674
France-Corsica Calvi Cb2_08 4.264 ± 0.979 0.523 ± 0.134 0.607 ± 0.115 0.140 0.0040 0.002 0.150 0.820
France-Corsica Moltifao Cb3_08 4.219 ± 1.358 0.546 ± 0.120 0.603 ± 0.110 0.096 0.0136 0.001 0.064 0.752
France-Corsica Moltifao Cb3_10 4.121 ± 0.867 0.611 ± 0.162 0.605 ± 0.131 −0.010 0.5996 0.005 0.064 0.590
France-Corsica Moltifao Cb3_12 4.307 ± 1.330 0.568 ± 0.197 0.576 ± 0.154 0.014 0.3401 0.064 0.410 0.850
France-Var department Roquebrune-sur-Argens V1_06 3.680 ± 0.794 0.560 ± 0.100 0.561 ± 0.082 0.103 0.0084 0.005 0.020 0.590
France-Var department Roquebrune-sur-Argens V1_08 3.501 ± 0.926 0.609 ± 0.112 0.584 ± 0.094 −0.044 0.4916 0.002 0.010 0.326
France-Var department Roquebrune-sur-Argens V1_10 3.690 ± 1.366 0.603 ± 0.150 0.587 ± 0.100 −0.029 0.8393 0.001 0.005 0.213
France-Var department Roquebrune-sur-Argens V1_12 3.566 ± 1.176 0.573 ± 0.125 0.592 ± 0.091 0.033 0.7551 0.001 0.001 0.082
France-Var department Roquebrune-sur-Argens V2_08 3.525 ± 0.361 0.515 ± 0.131 0.556 ± 0.127 0.075 0.2253 0.003 0.064 0.545
France-Var department Roquebrune-sur-Argens V2_10 3.744 ± 1.091 0.596 ± 0.146 0.581 ± 0.106 −0.027 0.0492 0.003 0.014 0.367
France-Var department Roquebrune-sur-Argens V2_12 4.031 ± 0.957 0.591 ± 0.103 0.570 ± 0.093 −0.038 0.8049 0.005 0.285 0.875
France-Var department Bormes-Les-Mimosas V3_08 3.820 ± 1.045 0.558 ± 0.147 0.572 ± 0.122 0.024 0.3183 0.014 0.150 0.633
France-Var department Bormes-Les-Mimosas V3_12 4.067 ± 1.045 0.519 ± 0.160 0.558 ± 0.117 0.072 0.0619 0.005 0.410 0.981
Italy-Sardinia San Giovanni Suergiu Sd_12 4.513 ± 1.926 0.560 ± 0.156 0.590 ± 0.143 0.052 0.0868 0.018 0.248 0.787

The allelic richness (AR), observed (HO) and expected (HE) heterozygosity and FIS are presented for each population. AR is based on the minimum sample size of 27 diploid individuals. FIS P-value adjusted at the nominal level (5 %) is 0.0002 after Bonferroni correction. Results of bottleneck tests (P-values) are presented for the Infinite Allele Model (IAM), Two-phase Model (TPM) and Stepwise Mutation Model (SMM)

The number at the end of each sample code corresponds to the collection year

Significant results of bottleneck tests are indicated in bold