. 2016 Mar 12;17:227. doi: 10.1186/s12864-016-2564-y

Table 5.

Potentially Light Regulated TFs and TRs in ChlamyNET. Their potential Arabidopsis ortholog and topological indexes are indicated as well

Chlamydomonas gene	Putative Arabidopsis Ortholog	Number of neighbours	Normalized hub score	Clustering coefficient
Cre06.g295200 CPH1 / CrCRYl	At4g08920 CRYPTOCHROME 1	57	8.12 x 10-⁵	0.39
Cre01.g043150 CrGBF1	At4g36730 G-BOX BINDING FACTOR 1	182	7.36 x 10-⁷	0.31
Cre12.g510200 CrHY5	At5g11260 ELONGATED HYPOCOTYL 5	133	0.32	0.47
Cre06.g310500 CrHYH	At3g17609 HY5-HOMOLOG	39	0.12	0.71
Cre12.g521150 CrDOF	At5g39660 CYCLING DOF FACTOR 2	27	3.79 x 10-⁸	0.34
g6302 CrCO	At5g15840 CONSTANS	58	2.29 x 10-⁴	0.40
Cre02.g094150 CrPRR9	At2g46790 PSEUDO-RESPONSE REGULATOR 9	1	7.72 x 10-⁷	0
Cre06.g275350 CrLHY	At1g01060 LATE ELONGATED HYPOCOTYL	78	5.86 x 10-⁷	0.38
g1542 CrLUX	At3g46640 LUX	38	2.23 x 10-⁷	0.40
Cre06.g277350 CrHD1	At4g38130 HISTONE DEACETYLASE 1	1	5.12 x 10-¹⁸	0
g16739 CrTOC1	At5g61380 TIMING OF CAB EXPRESSION 1	3	1.49 x 10-⁵	0.33
Cre14.g617350 CrUVR8	At5g63860 UVB-RESISTANCE 8	1	4.09 x 10-¹⁴	0
Cre05.g234300 CrCOP11	At3g61140 CONSTITUTIVE PHOTOMORPHOGENIC 11	36	7.81 x 10-¹⁴	0.37
Cre14.g608850 CrCOP9	At4g14110 CONSTITUTIVE PHOTOMORPHOGENIC 9	11	1.26 x 10-¹²	0.27
Cre17.g708300 CrRPN12A	At1g64520 REGULATORY PARTICLE NON-ATPASE 12A	57	7.44 x 10-¹⁴	0.39
Cre10.g439150 CrRPT5A	At3g05530 REGULATORY PARTICLE TRIPLE-A ATPASE 5A	51	7.49 x 10-¹⁴	0.45
Cre13.g581450 CrRPN7	At4g24820 REGULATORY PARTICLE NON-ATPASE 7	59	1.52 x 10-¹³	0.28
Cre06.g275650 CrRPN3A	At1g20200 REGULATORY PARTICLE NON-ATPASE 3A	14	2.80 x 10-¹⁵	0.41
Cre16.g663500 CrRPN10	At4g38630 REGULATORY PARTICLE NON-ATPASE 10	4	3.48 x 10-¹⁴	0
Cre04.g216600 CrRPT6A	At5g19990 REGULATORY PARTICLE TRIPLE-A ATPASE 6A	19	1.74 x 10-¹²	0.25
Cre07.g329700 CrRPT2A	At4g29040 REGULATORY PARTICLE TRIPLE-A ATPASE 2A	3	3.44 x 10-¹⁶	0.33