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. Author manuscript; available in PMC: 2017 Apr 1.
Published in final edited form as: Infect Genet Evol. 2016 Jan 30;39:201–211. doi: 10.1016/j.meegid.2016.01.025

Table 3.

Amino acid composition and cost analysis for the indels. Detailed analysis and statistics for amino acid composition and cost and P values are shown in Figure 2.

Position Amino
Acid*
Aglucose
cost
Deletions Insertions Shared Background
mean SD mean SD mean SD mean SD
Internal F* 1.84 4.24 11.31 3.53 11.89 3.69 11.68 4.38 2.07
I* 1.21 5.79 12.89 4.84 14.25 5.21 14.05 6.04 2.32
L* 1.21 8.85 15.81 7.27 17.11 7.93 17.07 9.32 2.83
M* 1.25 2.33 8.62 2.36 10.53 2.29 9.75 2.79 1.43
V* 0.96 6.40 13.87 5.67 15.48 6.00 15.14 6.57 2.37
Total 27.60 25.24 23.67 28.35 25.12 27.62 29.10 5.22
External D 0.61 5.53 13.28 5.99 16.09 5.79 15.13 5.54 2.14
E 0.86 6.63 14.57 6.89 17.38 6.75 16.26 6.68 2.77
H* 1.46 2.39 8.81 2.32 10.23 2.34 9.82 2.36 1.41
K* 1.31 6.29 14.08 6.27 16.50 6.09 15.46 6.54 2.98
N 0.79 4.83 12.74 5.60 15.59 5.23 14.50 4.44 1.92
Q 0.92 3.88 11.28 4.33 14.02 4.35 13.52 3.81 1.97
R* 1.39 5.53 12.99 5.37 15.08 5.44 14.34 5.91 2.51
Total 35.07 28.02 36.79 32.99 36.00 31.37 35.29 6.37
Ambivalent A 0.5 6.54 14.28 6.45 16.60 6.65 16.20 6.84 2.62
C 0.75 1.92 7.53 1.66 8.32 1.69 7.87 2.04 1.61
G 0.31 6.33 14.84 6.53 17.68 6.74 17.25 5.59 2.54
P 0.99 4.86 13.34 5.38 15.39 5.22 14.96 4.32 2.21
S 0.49 7.90 16.09 10.23 20.41 9.21 18.96 7.25 2.72
T* 0.69 5.36 13.16 5.98 16.16 5.76 15.31 5.15 1.96
W* 2.39 1.23 6.33 0.80 6.07 0.91 6.04 1.15 1.02
Y* 1.77 3.19 9.94 2.52 10.63 2.69 10.37 3.27 1.75
Total 37.32 28.60 39.54 33.56 38.88 32.24 35.61 5.55
Total Cost (Aglucose) 0.981 0.251 0.940 0.284 0.951 0.274 0.994 0.048
*

Auxothrophs in nematodes (Barrett, 1991)