Table 4.
Secondary structure constitution analysis for the indels. Detailed analysis and statistics for secondary structure constitution and P values are shown in Figure 4.
| Structure annotation |
label | Deletions | Insertions | Shared | Background | ||||
|---|---|---|---|---|---|---|---|---|---|
| mean | SD | mean | SD | mean | SD | mean | SD | ||
| didn’t align | - | 36.046 | 42.628 | 82.224 | 35.752 | 63.583 | 44.553 | 34.901 | 28.925 |
| Aligned region breakdown |
|||||||||
| isolated beta bridge | B | 0.966 | 4.999 | 0.762 | 6.805 | 0.827 | 5.438 | 0.981 | 1.587 |
| beta strand | E | 16.372 | 26.847 | 9.750 | 26.653 | 11.835 | 24.950 | 18.086 | 13.588 |
| 3–10 helix | G | 3.421 | 12.287 | 3.494 | 16.573 | 2.899 | 12.635 | 3.073 | 3.702 |
| alpha helix | H | 31.583 | 36.544 | 18.093 | 35.726 | 29.107 | 38.143 | 34.101 | 19.442 |
| pi helix | I | 0.017 | 0.853 | 0.005 | 0.682 | 0.025 | 1.069 | 0.018 | 0.277 |
| bend | S | 9.703 | 18.692 | 13.433 | 29.527 | 10.496 | 22.598 | 8.714 | 5.163 |
| turn | T | 12.002 | 20.988 | 14.773 | 31.111 | 12.175 | 24.204 | 10.483 | 5.333 |
| loop, or coils | C | 25.936 | 30.826 | 39.690 | 43.701 | 32.636 | 38.083 | 24.544 | 12.175 |