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The three colors correspond to the three groups inferred by Geneland. The dots are the collecting localities (see Fig 1), and are colored by clade: white = Clade A; blue = Clade B; red = Clade C; black = Clade D. The histogram shows the log of the ratio of the estimates rates of coalescence and the estimated Yule rates. Values above zero indicate the estimated rate of coalescence is higher.
