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. 2016 Mar 15;7:306. doi: 10.3389/fpls.2016.00306

Table 2.

List of genes encoded by five Epimedium chloroplast genome.

Category for genes	Group of genes	Name of genes
Self-replication	rRNA genes	rrn16^a, rrn23^a, rrn4.5^a, rrn5^a
	tRNA genes	trnA-UGC^,^a, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-GCC, trnG-UCC^, trnH-GUG, trnI-CAU^a, trnI-GAU,^a, trnK-UUU^, trnL-CAA^a, trnL-UAA^, trnL-UAG, trnM-CAU, trnN-GUU^a, trnP-UGG, trnQ-UUG^a, trnR-ACG^a, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC^a, trnV-UAC^, trnW-CCA, trnY-GUA*
	Small subunit of ribosome	rps2, rps3, rps4, rps7^a, rps8, rps11, rps12^*,^a, rps14, rps15, rps16^, rps18, rps19^b
	Large subunit of ribosome	rpl2^,^b, rpl14, rpl16^, rpl20, rpl22, rpl23^b, rpl32, rpl33, rpl36
	DNA dependent RNA polymerase	rpoA, rpoB, rpoC1^, rpoC2*
Genes for phytosynthesis	Subunits of NADH-dehydrogenase	ndhA^, ndhB^,^a, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK
	Subunits of photosystem I	psaA, psaB, psaC, psaI, psaJ, ycf3^**
	Subunits of photosystem II	psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ
	Subunits of cytochrome b/f complex	petA, petB^, petD^, petG, petL, petN
	Subunits of ATP synthase	atpA, atpB, atpE, atpF^, atpH, atpI*
	Large subunit of rubisco	rbcL
Other genes	Maturase	matK
	Protease	clpP^**
	Envelope membrane protein	cemA
	Subunit of Acetyl-CoA-carboxylase	accD
	c-type cytochrome synthesis gene	ccsA
Genes of unknown function	Open Reading Frames (ORF, ycf)	ycf1, ycf2^a, ycf4

^*

Gene with one intron,

^**

Gene with two introns,

^a

Gene with two copies,

^b

Gene with one or two copies.