Table 4. Significant KEGG gene set enriched in patients with clinical benefit to dacomitinib.
| Gene set | Size | ES | NES | Nominal p value | FDR q value | Rank at Max | |
|---|---|---|---|---|---|---|---|
| 1 | KEGG_JAK_STAT_SIGNLING_PATHWAY | 19 | 0.71 | 2.07 | 0.000 | 0.000 | 37 |
| 2 | KEGG_APOPTOSIS | 17 | 0.68 | 2.04 | 0.000 | 0.000 | 24 |
| 3 | KEGG_NEUROTROPHIN_PATHWAY | 19 | 0.67 | 1.99 | 0.000 | 0.000 | 19 |
| 4 | KEGG_ENDOCYTOSIS | 17 | 0.75 | 1.90 | 0.000 | 0.002 | 41 |
| 5 | KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION | 30 | 0.65 | 1.90 | 0.001 | 0.002 | 41 |
| 6 | KEGG_ERBB_SIGNALING_PATHWAY | 20 | 0.63 | 1.88 | 0.000 | 0.002 | 42 |
| 7 | KEGG_T-CELL_RECEPTOR_SIGNLING_PATHWAY | 15 | 0.61 | 1.87 | 0.000 | 0.002 | 33 |
| 8 | KEGG_REGULATION_OF_ACTIN_CYTOSKELETON | 20 | 0.59 | 1.83 | 0.001 | 0.003 | 40 |
| 9 | KEGG_PATHWAYS_IN_CANCER | 85 | 0.49 | 1.81 | 0.000 | 0.004 | 57 |
| 10 | KEGG_MELANOMA | 29 | 0.52 | 1.78 | 0.000 | 0.005 | 49 |
| 11 | KEGG_PROSTATE_CANCER | 31 | 0.50 | 1.78 | 0.000 | 0.005 | 69 |
| 12 | KEGG_GLIOMA | 25 | 0.51 | 1.78 | 0.000 | 0.004 | 49 |
| 13 | KEGG_CELL_CYCLE | 28 | 0.51 | 1.76 | 0.002 | 0.006 | 69 |
| 14 | KEGG_ACUTE _MYELOID_LEUKEMIA | 18 | 0.51 | 1.70 | 0.005 | 0.010 | 26 |
| 15 | KEGG_PANCREATIC_CANCER | 25 | 0.49 | 1.68 | 0.001 | 0.011 | 49 |
| 16 | KEGG_P53 _SIGNALING_PATHWAY | 20 | 0.51 | 1.67 | 0.001 | 0.012 | 77 |
| 17 | KEGG_MAPK_SIGNALING_PATHWAY | 36 | 0.52 | 1.67 | 0.005 | 0.012 | 42 |
| 18 | KEGG_NON_SMALL_CELL_LUNG_CANCER | 20 | 0.51 | 1.63 | 0.008 | 0.019 | 49 |
| 19 | KEGG_FOCAL_ADHESION | 31 | 0.50 | 1.60 | 0.037 | 0.023 | 62 |
| 20 | KEGG_ENDOMETRIAL_CANCER | 19 | 0.50 | 1.59 | 0.012 | 0.024 | 40 |
KEGG, Kyoto Encyclopedia of Genes and Genomes; ES, Enrichment score; NES, Normalized enrichment score