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. 2015 Oct 9;6(42):44971–44984. doi: 10.18632/oncotarget.6056

Table 4. Significant KEGG gene set enriched in patients with clinical benefit to dacomitinib.

Gene set Size ES NES Nominal p value FDR q value Rank at Max
1 KEGG_JAK_STAT_SIGNLING_PATHWAY 19 0.71 2.07 0.000 0.000 37
2 KEGG_APOPTOSIS 17 0.68 2.04 0.000 0.000 24
3 KEGG_NEUROTROPHIN_PATHWAY 19 0.67 1.99 0.000 0.000 19
4 KEGG_ENDOCYTOSIS 17 0.75 1.90 0.000 0.002 41
5 KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION 30 0.65 1.90 0.001 0.002 41
6 KEGG_ERBB_SIGNALING_PATHWAY 20 0.63 1.88 0.000 0.002 42
7 KEGG_T-CELL_RECEPTOR_SIGNLING_PATHWAY 15 0.61 1.87 0.000 0.002 33
8 KEGG_REGULATION_OF_ACTIN_CYTOSKELETON 20 0.59 1.83 0.001 0.003 40
9 KEGG_PATHWAYS_IN_CANCER 85 0.49 1.81 0.000 0.004 57
10 KEGG_MELANOMA 29 0.52 1.78 0.000 0.005 49
11 KEGG_PROSTATE_CANCER 31 0.50 1.78 0.000 0.005 69
12 KEGG_GLIOMA 25 0.51 1.78 0.000 0.004 49
13 KEGG_CELL_CYCLE 28 0.51 1.76 0.002 0.006 69
14 KEGG_ACUTE _MYELOID_LEUKEMIA 18 0.51 1.70 0.005 0.010 26
15 KEGG_PANCREATIC_CANCER 25 0.49 1.68 0.001 0.011 49
16 KEGG_P53 _SIGNALING_PATHWAY 20 0.51 1.67 0.001 0.012 77
17 KEGG_MAPK_SIGNALING_PATHWAY 36 0.52 1.67 0.005 0.012 42
18 KEGG_NON_SMALL_CELL_LUNG_CANCER 20 0.51 1.63 0.008 0.019 49
19 KEGG_FOCAL_ADHESION 31 0.50 1.60 0.037 0.023 62
20 KEGG_ENDOMETRIAL_CANCER 19 0.50 1.59 0.012 0.024 40

KEGG, Kyoto Encyclopedia of Genes and Genomes; ES, Enrichment score; NES, Normalized enrichment score