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. Author manuscript; available in PMC: 2016 May 18.
Published in final edited form as: Mucosal Immunol. 2015 Sep 16;9(3):610–620. doi: 10.1038/mi.2015.85

Table 1.

Primers and Probes for Semiquantitative Real-Time RT-PCR

Gene Oligo Primer sequence
DNA polymerase (ORF9) Forward 5’-ACAGCAGCTGGCCATAAAGG-3’
Reverse 5’-TCCTGCCCTGGAAAGTGATG-3’
Probe 5’-CCTCTGGAATGTTGCCTTGCCTCCA-3’
β-Actin Forward 5’-CCGTGAAAAGATGACCCAGATC-3’
Reverse 5’-CACAGCCTGGATGGCTACGT-3’
Probe 5’-TTTGAGACCTTCAACACCCCCAGCCA-3’
Collagen I Forward 5’-TGACTGGAAGAGCGGAGAGTACT-3’
Reverse 5’-GGTCTGACCTGTCTCCATGTTG-3’
Probe 5’-CTGCAACCTGGACGCCATCAAGG-3’
Collagen III Forward 5’-GGATCTGTCCTTTGCGATGAC-3’
Reverse 5GCTGTGGGCATATTGCACAA-3’
Probe 5’-TGCCCCAACCCAGAGATCCCATTT-3’
Fibronectin Forward 5’-TCGAGCCCTGAGGATGGA-3’
Reverse 5’-GTGCAAGGCAACCACACTGA-3’
Probe 5’-CTGCAGGGCCTCAGGCCGG-3’
IL23 p19 Forward 5’-CTCCCTACTAGGACTCAGCCAACT-3’
Reverse 5’-ACTCAGGCTGGGCATCTGTT-3’
Probe 5’-AGCCAGAGGATCACCCCCGGG-3’
IL6 Forward 5’-GACTTCCATCCAGTTGCCTTCT-3’
Reverse 5’-CTGTTGGGAGTGGTATCCTCTGT-3’
Probe 5’-TGACAACCACGGCCTTCCCTACTTCA-3’
IL1β Forward 5’-GAGCCCATCCTCTGTGACTCA-3’
Reverse 5’-GTTGTTCATCTCGGAGCCTGTAG-3’
Probe 5’-AACCTGCTGGTGTGTGACGTTCCCA-3’
IL12 p35 Forward 5’-GTTGCCTGGCTACTAGAGAGACTTC-3’
Reverse 5’-GCACAGGGTCATCATCAAAGAC-3’
Probe 5’-ACAACAAGAGGGAGCTGCCTGCC-3’
IFN-γ Forward 5’-GCAACAGCAAGGCGAGAAA-3’
Reverse 5’-GCTGGATTCCGGCAACAG-3’
Probe 5’-AGGTCAACAACCCACAGGTCCAGCG-3’