Erratum
The original version of this article [1] unfortunately contained a mistake in Table 1. The primer sequence which corresponds to KmtnC-R in the table 1 was provided incorrectly. The correct nucleotide sequence is:
KmtnC-R:GCATGGCCCAGGTGTTCAG
An updated version of Table 1 has been provided below.
Table 1.
Amplification conditionsa | Name of combination primers | Shared unique genes, oligonucleotides and sequence (5′- 3′) of each bacterial specie | |||||
---|---|---|---|---|---|---|---|
K. pneumoniae | Amplification fragment (bp) | K. variicola | Amplification fragment (bp) | Klebsiella spp. | Amplification fragment (bp) | ||
phosphohydrolase | phosphoglycerate mutase | phosphopentane phosphatase (mtnC) | |||||
1 | M-PCR-1 | KP888-F: AAGCAAGCCAGAACAGAAAG | 888 | KV770-F: TCCCGAGGTTCACATTTCC | 449 | KmtnC-F: CCGCCGACCTTATCACTAC | 340 |
KP888-R: ACTTCGGTTTTATCCAGGTC | KV770-R: AGCGGGTGAACGTCGATAC | KmtnC-R: GCATGGCCCAGGTGTTCAG | |||||
transferase (yphG) | N-acetyltransferase | phosphopentane phosphatase (mtnC) | |||||
1 | M-PCR-2 | KP878-F: ACCGATAACCAGCCTGACTT | 878 | KV1615-F: ACACAACATTTCAGGCGGCT | 499 | KmtnC-F: CCGCCGACCTTATCACTAC | 340 |
KP878-R: CTTTCTTCTGCCCACTGTTG | KV1615-R: GGGCGTGGCTTTTTTCATCG | KmtnC-R: GCATGGCCCAGGTGTTCAG | |||||
phosphohydrolase | thiopurine S-methyltransferase | phosphopentane phosphatase (mtnC) | |||||
2 | M-PCR-3 | KP888-F: AAGCAAGCCAGA ACAGAAAG | 888 | KV1000-F: CTGGGATGTGGCAATGGTG | 438 | KmtnC-F: CCGCCGACCTTATCACTAC | 340 |
KP888-R: ACTTCGGTTTTATCCAGGTC | KV1000-F: AAACTGCGCCTGCTGTATC | KmtnC-R: GCATGGCCCAGGTGTTCAG |
aMultiplex-PCR conditions used under the oligonucleotides combinations. 1: 5pmol/reaction of K. variicola and Klebsiella spp, 25pmol/reaction of K. pneumoniae; 2: 25 pmol/reaction of K. pneumoniae, 5 pmol/reaction of K. variicola and 1 pmol/reaction of Klebsiella spp
Footnotes
The online version of the original article can be found under doi:10.1186/s12866-015-0396-6.
References
- 1.Garza-Ramos et al. BMC Microbiology (2015) 15:64. doi:10.1186/s12866-015-0396-6. [DOI] [PMC free article] [PubMed]