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. 2015 Mar 18;24(1):78–85. doi: 10.1038/ejhg.2015.55

Table 2. Variant predictions for identified SMCHD1 missense variants.

  c.3538G>A, p.Gly1180Arg c.2941T>G, p.Tyr981Asp c.5596C>G, p.Arg1866Gly
Conservation (PhyloP) Moderate (4.16) Moderate (2.38) Weak (1,09)
Grantham distance Moderate (125) Large (160) Moderate (125)
Align GVGD C15 (GV: 206.04–GD: 124.98) C65 (GV: 0.00–GD: 159.94) C65 (GV: 0.00–GD: 125.13)
SIFT Deleterious (Score: 0) Deleterious (Score: 0) Deleterious (Score: 0)
Mutation taster Disease causing (P-value: 0.999) Disease causing (P-value: 0.689) Disease causing (P-value: 0.882)