Table 2. Variant predictions for identified SMCHD1 missense variants.
c.3538G>A, p.Gly1180Arg | c.2941T>G, p.Tyr981Asp | c.5596C>G, p.Arg1866Gly | |
---|---|---|---|
Conservation (PhyloP) | Moderate (4.16) | Moderate (2.38) | Weak (1,09) |
Grantham distance | Moderate (125) | Large (160) | Moderate (125) |
Align GVGD | C15 (GV: 206.04–GD: 124.98) | C65 (GV: 0.00–GD: 159.94) | C65 (GV: 0.00–GD: 125.13) |
SIFT | Deleterious (Score: 0) | Deleterious (Score: 0) | Deleterious (Score: 0) |
Mutation taster | Disease causing (P-value: 0.999) | Disease causing (P-value: 0.689) | Disease causing (P-value: 0.882) |