Skip to main content
. 2016 Mar 18;6:23249. doi: 10.1038/srep23249

Figure 7. Illustrations of the rigid-body sampling module.

Figure 7

(a) Cuboidal sampling is used for energy calculations between a ligand and a planar receptor, e.g. a membrane generated by ProBLM Web-server73 is shown. (b) Spherical sampling is used for energy calculations between a ligand and a globular protein receptor, e.g. a barnase [PDBID: 1brs] is shown. (c) Cylindrical sampling is used for energy calculations between a ligand and a cylindrical receptor. In each panel, the yellow dots represent mass centers of rotamers of the ligand.